Agmon & Barth (2024) reviewed that the number of proposed cortical SST interneu…

Details

scope: mouse neocortex (review)
section_id: section_01
source_url: https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_01_evidence_package.json
review_repo: ComputationalReviewVIP
section_ref: wiki_page:computationalreviewvip-01-introduction
source_kind: review_finding
source_path: evidence/section_01_evidence_package.json
source_span: The number of proposed transcriptomic types ('t-types' or 'clusters') of cortical SST (as well as other) interneurons has been rising exponentially, doubling or tripling from one study to the next.
study_system: mouse neocortex (review)
section_title: Introduction
review_bundle_ref: analysis_bundle:ab-2ce40c33e827
replication_status: replicated
review_package_ref: analysis_bundle:ab-2ce40c33e827
source_artifact_ref: wiki_page:computationalreviewvip-01-introduction
origin_url: https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_01_evidence_package.json
commit_sha: 95e761177f7d2ec565983d3307c14ec238f9677c
created_by: persona-jerome-lecoq-gbo-neuroscience
repository_url: https://github.com/AllenNeuralDynamics/ComputationalReviewVIP

Raw fields (6)

claim_text

Agmon & Barth (2024) reviewed that the number of proposed cortical SST interneuron transcriptomic types has been rising exponentially, doubling or tripling between studies, and argued that the ~10 'supertypes' level (12 SST supertypes among 30 GABAergic supertypes in Yao 2021) most closely matches morphology/electrophysiology/neurochemistry-defined classes.

raw_fields

{
  "n": null,
  "doi": "10.3389/fncir.2024.1436915",
  "claim": "Agmon & Barth (2024) reviewed that the number of proposed cortical SST interneuron transcriptomic types has been rising exponentially, doubling or tripling between studies, and argued that the ~10 'supertypes' level (12 SST supertypes among 30 GABAergic supertypes in Yao 2021) most closely matches morphology/electrophysiology/neurochemistry-defined classes.",
  "title": null,
  "cite_key": "Agmon2024",
  "evidence": "Quantitative review: out of 30 GABAergic supertypes in Yao et al. 2021 mouse isocortex/HPF taxonomy, 12 are SST; supertypes correspond more cleanly than t-types to traditional morpho-electric classes; provides a critical perspective on lumping/splitting in CGE-derived (incl. VIP) typing.",
  "effect_size": null,
  "text_access": "fulltext",
  "study_system": "mouse neocortex (review)",
  "target_section": "section_02",
  "_source_cluster": "cluster_01_molecular_taxonomy",
  "replication_status": "replicated",
  "_source_cluster_index": 29,
  "claim_source_sentence": "The number of proposed transcriptomic types ('t-types' or 'clusters') of cortical SST (as well as other) interneurons has been rising exponentially, doubling or tripling from one study to the next."
}

source_refs

[
  "paper:paper-5d546dd2545a"
]

evidence_refs

[
  {
    "ref": "paper:paper-5d546dd2545a"
  }
]

source_policy

{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "95e761177f7d2ec565983d3307c14ec238f9677c",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP"
}

evidence_summary

Quantitative review: out of 30 GABAergic supertypes in Yao et al. 2021 mouse isocortex/HPF taxonomy, 12 are SST; supertypes correspond more cleanly than t-types to traditional morpho-electric classes; provides a critical perspective on lumping/splitting in CGE-derived (incl. VIP) typing.

Agmon & Barth (2024) reviewed that the number of proposed cortical SST interneu…

Details

Replication

Discussion