Details

scope
comparative
section_id
section_15
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewLoops/blob/0632aae8abc141909207fe91f6349b9e36489c3b/evidence/section_15_evidence_package.json
effect_size
8.5%
review_repo
ComputationalReviewLoops
section_ref
wiki_page:computationalreviewloops-15
source_kind
review_finding
source_path
evidence/section_15_evidence_package.json
study_system
comparative
section_title
Species Differences and Evolutionary Scaling of Loop Architecture
evidence_summary
fulltext
review_bundle_ref
analysis_bundle:ab-d49e54403ef9
replication_status
independently_replicated
review_package_ref
analysis_bundle:ab-d49e54403ef9
source_artifact_ref
wiki_page:computationalreviewloops-15
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewLoops/blob/0632aae8abc141909207fe91f6349b9e36489c3b/evidence/section_15_evidence_package.json
commit_sha
0632aae8abc141909207fe91f6349b9e36489c3b
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewLoops
Raw fields (6)
claim_text
Consistent with the observation of the most distinctive transcriptional signatures in GLUT HVC (RA) -PNs and RA-PNs of F 1 hybrids compared to ZFs and CFs, we found that these GLUT-projecting neurons in the VMP expressed more nonadditive genes (189 and 406 genes, respectively) than other cell types
raw_fields
{
  "n": 7,
  "doi": "10.1126/sciadv.adn3409",
  "claim": "Consistent with the observation of the most distinctive transcriptional signatures in GLUT HVC (RA) -PNs and RA-PNs of F 1 hybrids compared to ZFs and CFs, we found that these GLUT-projecting neurons in the VMP expressed more nonadditive genes (189 and 406 genes, respectively) than other cell types ",
  "cite_key": "Shibata2024",
  "evidence": "fulltext",
  "effect_size": "8.5%",
  "text_access": "fulltext",
  "study_system": "comparative",
  "source_cluster_id": "cluster_14",
  "replication_status": "independently_replicated",
  "claim_source_sentence": "Consistent with the observation of the most distinctive transcriptional signatures in GLUT HVC (RA) -PNs and RA-PNs of F 1 hybrids compared to ZFs and CFs, we found that these GLUT-projecting neurons in the VMP expressed more nonadditive genes (189 and 406 genes, respectively) than other cell types ( Fig. 6B ).",
  "replication_evidence_dois": [
    "10.3389/fnana.2026.1606172",
    "10.7554/elife.104609"
  ],
  "effect_size_source_sentence": "In addition, we found that a certain number of the nonadditive genes composing the enriched GO terms exhibited significant correlations with the degree of song learning, in terms of syllable learning rate, syllable repertoire size, or both, across F 1 hybrids (8.5% of 82 genes and 9.1% of 164 genes in HVC (RA) -PNs and RA-PNs, respectively) ( n = 7 birds) ( Fig. 7A )."
}
source_refs
[
  "paper:paper-6bef62df5a5f"
]
source_span
Consistent with the observation of the most distinctive transcriptional signatures in GLUT HVC (RA) -PNs and RA-PNs of F 1 hybrids compared to ZFs and CFs, we found that these GLUT-projecting neurons in the VMP expressed more nonadditive genes (189 and 406 genes, respectively) than other cell types ( Fig. 6B ).
evidence_refs
[
  {
    "ref": "paper:paper-6bef62df5a5f"
  }
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "0632aae8abc141909207fe91f6349b9e36489c3b",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewLoops"
}

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