Version history

{
  "scope": "rodent S1 cortex; biophysical microcircuit modeling",
  "claim_text": "A multi-layer biophysical model of rodent somatosensory cortex incorporating PV/SOM/VIP interneurons with cell-type-specific short-term plasticity reproduces in vivo population firing-rate data, captures PV/SOM-mediated inhibition and VIP-mediated disinhibition of excitatory cells, and predicts that STP modulates response magnitudes by switching the dominant inhibitory pathway.",
  "raw_fields": {
    "n": null,
    "doi": "10.1093/cercor/bhae378",
    "claim": "A multi-layer biophysical model of rodent somatosensory cortex incorporating PV/SOM/VIP interneurons with cell-type-specific short-term plasticity reproduces in vivo population firing-rate data, captures PV/SOM-mediated inhibition and VIP-mediated disinhibition of excitatory cells, and predicts that STP modulates response magnitudes by switching the dominant inhibitory pathway.",
    "title": null,
    "cite_key": "Jiang2024b",
    "evidence": "Multi-layer microcircuit model fitted to in vivo cell-type-specific firing rates; STP version added to test predictions.",
    "effect_size": null,
    "text_access": "abstract_only",
    "study_system": "rodent S1 cortex; biophysical microcircuit modeling",
    "target_section": "section_05",
    "_source_cluster": "cluster_01_molecular_taxonomy",
    "replication_status": "replication_unknown",
    "_source_cluster_index": 105,
    "claim_source_sentence": "The model reproduces the experimentally observed inhibitory effects of PV and SOM cells and disinhibitory effect of VIP cells on excitatory cells. We further create a version of the model incorporating cell-type-specific short-term synaptic plasticity (STP). While the ongoing activity with and without STP is similar, STP modulates the responses of Exc, SOM, and VIP cells to cell-type-specific stimulation, presumably by changing the dominant inhibitory pathways.",
    "replication_evidence_dois": [],
    "effect_size_source_sentence": null
  },
  "section_id": "section_01",
  "source_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_01_evidence_package.json",
  "effect_size": null,
  "review_repo": "ComputationalReviewVIP",
  "section_ref": "wiki_page:computationalreviewvip-01-introduction",
  "source_kind": "review_finding",
  "source_path": "evidence/section_01_evidence_package.json",
  "source_refs": [
    "paper:paper-8797c32e2132"
  ],
  "source_span": "The model reproduces the experimentally observed inhibitory effects of PV and SOM cells and disinhibitory effect of VIP cells on excitatory cells. We further create a version of the model incorporating cell-type-specific short-term synaptic plasticity (STP). While the ongoing activity with and without STP is similar, STP modulates the responses of Exc, SOM, and VIP cells to cell-type-specific stimulation, presumably...",
  "study_system": "rodent S1 cortex; biophysical microcircuit modeling",
  "evidence_refs": [
    {
      "ref": "paper:paper-8797c32e2132"
    }
  ],
  "section_title": "Introduction",
  "source_policy": {
    "mode": "public_source_pointer_with_short_context",
    "notes": [
      "Local review repositories are read-only inputs.",
      "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
    ],
    "source_commit_sha": "95e761177f7d2ec565983d3307c14ec238f9677c",
    "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP"
  },
  "evidence_summary": "Multi-layer microcircuit model fitted to in vivo cell-type-specific firing rates; STP version added to test predictions.",
  "review_bundle_ref": "analysis_bundle:ab-2ce40c33e827",
  "replication_status": "replication_unknown",
  "review_package_ref": "analysis_bundle:ab-2ce40c33e827",
  "source_artifact_ref": "wiki_page:computationalreviewvip-01-introduction",
  "origin_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_01_evidence_package.json",
  "commit_sha": "95e761177f7d2ec565983d3307c14ec238f9677c",
  "created_by": "persona-jerome-lecoq-gbo-neuroscience",
  "repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP"
}