Details

scope
Physiology of layer 5 pyramidal neurons in mouse primary visual cortex: coincidence detection through bursting.
claim_text
Mouse V1 L5 pyramidal physiology — review-style statement of L5↔L5 recurrent excitatory connections within the column.
section_id
section_03
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_03_evidence_package.json
review_repo
ComputationalReviewRecurrence
section_ref
wiki_page:computationalreviewrecurrence-03-paired-recording
source_kind
review_finding
source_path
evidence/section_03_evidence_package.json
study_system
Physiology of layer 5 pyramidal neurons in mouse primary visual cortex: coincidence detection through bursting.
section_title
3. Paired-recording evidence in mouse — connection probabilities and synaptic strengths between pyramidal cells within a column, layer-by-layer (Lefort, Petersen, Adesnik, Feldmeyer, Markram-style work in mouse)
review_bundle_ref
analysis_bundle:ab-d9c479db9be9
replication_status
unevaluated
review_package_ref
analysis_bundle:ab-d9c479db9be9
source_artifact_ref
wiki_page:computationalreviewrecurrence-03-paired-recording
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_03_evidence_package.json
commit_sha
79ce062d54a924ce05953ec90aa9d26044d2b48f
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence
Raw fields (6)
raw_fields
{
  "n": null,
  "doi": "10.1371/journal.pcbi.1004090",
  "claim": "Mouse V1 L5 pyramidal physiology — review-style statement of L5↔L5 recurrent excitatory connections within the column.",
  "cite_key": "Shai2015",
  "evidence": "L5 pyramidal neurons are the only neocortical cell type with dendrites reaching all six layers of cortex, casting them as one of the main integrators in the cortical column. What is the nature and mode of computation performed in mouse primary visual cortex (V1) given the physiology of L5 pyramidal neurons? First, we experimentally establish active properties of the dendrites of L5 pyramidal neurons of mouse V1 using patch-clamp recordings. Using a detailed multi-compartmental model, we show this physiological setup to be well suited for coincidence detection between basal and apical tuft inputs by controlling the frequency of spike output. We further show how direct inhibition of calcium channels in the dendrites modulates such coincidence detection. To establish the singe-cell computation that this biophysics supports, we show that the combination of frequency-modulation of somatic output by tuft input and (simulated) calcium-channel blockage functionally acts as a composite sigmoidal function. Finally, we explore how this computation provides a mechanism whereby dendritic spiking contributes to orientation tuning in pyramidal neurons.",
  "effect_size": null,
  "text_access": "fulltext",
  "study_system": "Physiology of layer 5 pyramidal neurons in mouse primary visual cortex: coincidence detection through bursting.",
  "argument_role": "supporting",
  "replication_status": null,
  "claim_source_sentence": "Alongside the long-range axons of L5 pyramidal neurons in mouse V1, reciprocal excitatory connections among L5 pyramidal neurons also exist within the local circuit, contributing to a recurrent excitatory substrate for coincidence detection and bursting.",
  "source_provenance_status": "ok",
  "replication_evidence_dois": [],
  "effect_size_source_sentence": null
}
source_refs
[
  "paper:pmid:25768881"
]
source_span
Alongside the long-range axons of L5 pyramidal neurons in mouse V1, reciprocal excitatory connections among L5 pyramidal neurons also exist within the local circuit, contributing to a recurrent excitatory substrate for coincidence detection and bursting.
evidence_refs
[
  {
    "ref": "paper:pmid:25768881"
  }
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "79ce062d54a924ce05953ec90aa9d26044d2b48f",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence"
}
evidence_summary
L5 pyramidal neurons are the only neocortical cell type with dendrites reaching all six layers of cortex, casting them as one of the main integrators in the cortical column. What is the nature and mode of computation performed in mouse primary visual cortex (V1) given the physiology of L5 pyramidal neurons? First, we experimentally establish active properties of the dendrites of L5 pyramidal neurons of mouse V1 using patch-clamp recordings. Using a detailed multi-compartmental model, we show this physiological setup to be well suited for coincidence detection between basal and apical tuft inputs by controlling the frequency of spike output. We further show how direct inhibition of calcium channels in the dendrites modulates such coincidence detection. To establish the singe-cell computation that this biophysics supports, we show that the combination of frequency-modulation of somatic output by tuft input and (simulated) calcium-channel blockage functionally acts as a composite sigmoidal function. Finally, we explore how this computation provides a mechanism whereby dendritic spiking contributes to orientation tuning in pyramidal neurons.

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