Version history

{
  "scope": "Mouse, brain-wide",
  "claim_text": "The Allen Mouse Brain Connectome Atlas establishes a whole-mouse-brain wiring diagram from standardized AAV anterograde tracing experiments imaged at brain-wide scale.",
  "raw_fields": {
    "n": null,
    "doi": "10.1016/j.cell.2014.04.023",
    "claim": "The Allen Mouse Brain Connectome Atlas establishes a whole-mouse-brain wiring diagram from standardized AAV anterograde tracing experiments imaged at brain-wide scale.",
    "cite_key": "Sporns2014",
    "evidence": "Commentary summarising the Allen Institute mesoscale connectome (Oh et al. 2014, Nature) — standardized AAV anterograde injections with brain-wide imaging produce the mouse cortical projection matrix.",
    "effect_size": "Whole-mouse-brain wiring diagram (qualitative)",
    "text_access": "abstract_only",
    "study_system": "Mouse, brain-wide",
    "argument_role": "supporting",
    "replication_status": "replicated",
    "claim_source_sentence": "In a recent issue of Nature, Oh et al. present a wiring diagram of the whole mouse brain, where standardized labeling, tracing, and imaging of axonal connections reveal new details in the network organization of neuronal connectivity.",
    "source_provenance_status": "non_substring_match",
    "replication_evidence_dois": [
      "10.1162/netn_a_00066",
      "10.1038/s41586-019-1716-z"
    ],
    "effect_size_source_sentence": null
  },
  "section_id": "section_08",
  "source_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_08_evidence_package.json",
  "effect_size": "Whole-mouse-brain wiring diagram (qualitative)",
  "review_repo": "ComputationalReviewRecurrence",
  "section_ref": "wiki_page:computationalreviewrecurrence-08-cross-areal",
  "source_kind": "review_finding",
  "source_path": "evidence/section_08_evidence_package.json",
  "source_refs": [
    "paper:paper-d969b50657cd"
  ],
  "source_span": "In a recent issue of Nature, Oh et al. present a wiring diagram of the whole mouse brain, where standardized labeling, tracing, and imaging of axonal connections reveal new details in the network organization of neuronal connectivity.",
  "study_system": "Mouse, brain-wide",
  "evidence_refs": [
    {
      "ref": "paper:paper-d969b50657cd"
    }
  ],
  "section_title": "8. Cross-areal mouse cortico-cortical excitatory connectivity — hierarchical feedforward and feedback as recurrent loops at the network level; Allen Mouse Connectivity Atlas anchored views",
  "source_policy": {
    "mode": "public_source_pointer_with_short_context",
    "notes": [
      "Local review repositories are read-only inputs.",
      "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
    ],
    "source_commit_sha": "79ce062d54a924ce05953ec90aa9d26044d2b48f",
    "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence"
  },
  "evidence_summary": "Commentary summarising the Allen Institute mesoscale connectome (Oh et al. 2014, Nature) — standardized AAV anterograde injections with brain-wide imaging produce the mouse cortical projection matrix.",
  "review_bundle_ref": "analysis_bundle:ab-d9c479db9be9",
  "replication_status": "replicated",
  "review_package_ref": "analysis_bundle:ab-d9c479db9be9",
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  "origin_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_08_evidence_package.json",
  "commit_sha": "79ce062d54a924ce05953ec90aa9d26044d2b48f",
  "created_by": "persona-jerome-lecoq-gbo-neuroscience",
  "repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence"
}