Version history

{
  "scope": "rat (BAMS-curated literature) plus cross-species integration",
  "claim_text": "The Brain Architecture Knowledge Management System (BAMS) implements a Topological Relations schema and Projections Translations inference engine that automatically translates neuroanatomical projection reports across multiple nomenclatures, integrating literature-curated connectivity at scale.",
  "raw_fields": {
    "n": 1000,
    "doi": "10.3389/fninf.2010.00003",
    "claim": "The Brain Architecture Knowledge Management System (BAMS) implements a Topological Relations schema and Projections Translations inference engine that automatically translates neuroanatomical projection reports across multiple nomenclatures, integrating literature-curated connectivity at scale.",
    "cite_key": "Bota2010",
    "evidence": "Database paper describing curation methods, schema, and inference engine for cross-nomenclature integration.",
    "effect_size": ">1,000 topological relations inserted; 21 nomenclatures collated for BST",
    "text_access": "fulltext",
    "study_system": "rat (BAMS-curated literature) plus cross-species integration",
    "source_cluster_id": "cluster_01",
    "replication_status": "replicated",
    "claim_source_sentence": "To address this problem a new Topological Relations schema for the Relations module of BAMS (Brain Architecture Knowledge Management System) was created.",
    "replication_evidence_dois": [
      "10.3389/fninf.2012.00002"
    ],
    "effect_size_source_sentence": "Second, more than 1,000 topological relations between brain gray matter regions for the rat were inserted, along with associated details."
  },
  "section_id": "section_16",
  "source_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewLoops/blob/0632aae8abc141909207fe91f6349b9e36489c3b/evidence/section_16_evidence_package.json",
  "effect_size": ">1,000 topological relations inserted; 21 nomenclatures collated for BST",
  "review_repo": "ComputationalReviewLoops",
  "section_ref": "wiki_page:computationalreviewloops-16",
  "source_kind": "review_finding",
  "source_path": "evidence/section_16_evidence_package.json",
  "source_refs": [
    "paper:paper-86c7fdacd547"
  ],
  "source_span": "To address this problem a new Topological Relations schema for the Relations module of BAMS (Brain Architecture Knowledge Management System) was created.",
  "study_system": "rat (BAMS-curated literature) plus cross-species integration",
  "evidence_refs": [
    {
      "ref": "paper:paper-86c7fdacd547"
    }
  ],
  "section_title": "Synthesis: Reassessing the Generalized Loop Model 25 Years On",
  "source_policy": {
    "mode": "public_source_pointer_with_short_context",
    "notes": [
      "Local review repositories are read-only inputs.",
      "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
    ],
    "source_commit_sha": "0632aae8abc141909207fe91f6349b9e36489c3b",
    "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewLoops"
  },
  "evidence_summary": "Database paper describing curation methods, schema, and inference engine for cross-nomenclature integration.",
  "review_bundle_ref": "analysis_bundle:ab-d49e54403ef9",
  "replication_status": "replicated",
  "review_package_ref": "analysis_bundle:ab-d49e54403ef9",
  "source_artifact_ref": "wiki_page:computationalreviewloops-16",
  "origin_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewLoops/blob/0632aae8abc141909207fe91f6349b9e36489c3b/evidence/section_16_evidence_package.json",
  "commit_sha": "0632aae8abc141909207fe91f6349b9e36489c3b",
  "created_by": "persona-jerome-lecoq-gbo-neuroscience",
  "repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewLoops"
}