Details

scope
Developing ferret visual cortex (opto-macroscope; method translates to mouse)
section_id
section_15
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_15_evidence_package.json
effect_size
patterned opto + concurrent imaging across mm-scale cortical area
review_repo
ComputationalReviewRecurrence
section_ref
wiki_page:computationalreviewrecurrence-15-methods-limits
source_kind
review_finding
source_path
evidence/section_15_evidence_package.json
study_system
Developing ferret visual cortex (opto-macroscope; method translates to mouse)
evidence_summary
Instrument validation across hundreds-of-microns to several-mm scales; reactivation of endogenous developing-ferret-cortex networks.
review_bundle_ref
analysis_bundle:ab-d9c479db9be9
replication_status
instrument-paper
review_package_ref
analysis_bundle:ab-d9c479db9be9
source_artifact_ref
wiki_page:computationalreviewrecurrence-15-methods-limits
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_15_evidence_package.json
commit_sha
79ce062d54a924ce05953ec90aa9d26044d2b48f
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence
Raw fields (7)
claim_text
An artifact-free 'opto-macroscope' delivers patterned optogenetic stimulation at high spatial and temporal resolution across millimeters of brain while simultaneously imaging functional neural activity, demonstrated in developing ferret visual cortex where it reactivated spatially complex endogenous networks — extending all-optical interrogation from cellular to functional-network spatial scales.
raw_fields
{
  "n": 0,
  "doi": "10.1016/j.jneumeth.2023.110051",
  "claim": "An artifact-free 'opto-macroscope' delivers patterned optogenetic stimulation at high spatial and temporal resolution across millimeters of brain while simultaneously imaging functional neural activity, demonstrated in developing ferret visual cortex where it reactivated spatially complex endogenous networks — extending all-optical interrogation from cellular to functional-network spatial scales.",
  "cite_key": "Mulholland2024",
  "evidence": "Instrument validation across hundreds-of-microns to several-mm scales; reactivation of endogenous developing-ferret-cortex networks.",
  "effect_size": "patterned opto + concurrent imaging across mm-scale cortical area",
  "text_access": "abstract_only",
  "study_system": "Developing ferret visual cortex (opto-macroscope; method translates to mouse)",
  "argument_role": "supporting",
  "replication_status": "instrument-paper",
  "claim_source_sentence": "We describe an opto-macroscope, an artifact-free, all-optical system capable of delivering patterned optogenetic stimulation with high spatial and temporal resolution across millimeters of brain while simultaneously imaging functional neural activity.",
  "source_provenance_status": "non_substring_match",
  "replication_evidence_dois": [],
  "effect_size_source_sentence": "this approach provides direct manipulation of cortical regions ranging from hundreds of microns to several millimeters in area"
}
source_refs
[
  "paper:paper-4572229f87f2"
]
source_span
We describe an opto-macroscope, an artifact-free, all-optical system capable of delivering patterned optogenetic stimulation with high spatial and temporal resolution across millimeters of brain while simultaneously imaging functional neural activity.
evidence_refs
[
  {
    "ref": "paper:paper-4572229f87f2"
  }
]
section_title
15. Methodological limits and emerging tools — what current mouse-cortex tools cannot yet measure about E→E recurrence (subthreshold network activity, fast plasticity in vivo, millimetre-scale dynamic connectomes), and what is on the near horizon
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "79ce062d54a924ce05953ec90aa9d26044d2b48f",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence"
}

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