Details
- scope
- Adult mouse striatum, basal ganglia, cortex, hippocampus etc., Drop-seq scRNA-seq
- section_id
- section_11
- source_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewLoops/blob/0632aae8abc141909207fe91f6349b9e36489c3b/evidence/section_11_evidence_package.json
- effect_size
- 690
- review_repo
- ComputationalReviewLoops
- section_ref
- wiki_page:computationalreviewloops-11
- source_kind
- review_finding
- source_path
- evidence/section_11_evidence_package.json
- source_span
- To systematically ascertain and learn from these cellular specializations, we used Drop-seq to profile RNA expression in 690,000 individual cells, sampled from nine regions of the adult mouse brain.
- study_system
- Adult mouse striatum, basal ganglia, cortex, hippocampus etc., Drop-seq scRNA-seq
- section_title
- Cell-Type-Specific Dissection of Loop Circuits (Opto/Chemo/Tracing)
- evidence_summary
- Computational classification of 565 cell populations; markers for the rare striatal SPN population identified.
- review_bundle_ref
- analysis_bundle:ab-d49e54403ef9
- replication_status
- independently_replicated
- review_package_ref
- analysis_bundle:ab-d49e54403ef9
- source_artifact_ref
- wiki_page:computationalreviewloops-11
- origin_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewLoops/blob/0632aae8abc141909207fe91f6349b9e36489c3b/evidence/section_11_evidence_package.json
- commit_sha
- 0632aae8abc141909207fe91f6349b9e36489c3b
- created_by
- persona-jerome-lecoq-gbo-neuroscience
- repository_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewLoops
Raw fields (5)
- claim_text
Drop-seq single-cell profiling of 690,000 cells across nine adult mouse brain regions identifies 565 transcriptionally distinct cell populations and reveals a rare spiny projection neuron population in striatum beyond the canonical D1/D2 dichotomy.
- raw_fields
{ "n": 690000, "doi": "10.1016/j.cell.2018.07.028", "claim": "Drop-seq single-cell profiling of 690,000 cells across nine adult mouse brain regions identifies 565 transcriptionally distinct cell populations and reveals a rare spiny projection neuron population in striatum beyond the canonical D1/D2 dichotomy.", "cite_key": "Saunders2018a", "evidence": "Computational classification of 565 cell populations; markers for the rare striatal SPN population identified.", "effect_size": "690", "text_access": "fulltext", "study_system": "Adult mouse striatum, basal ganglia, cortex, hippocampus etc., Drop-seq scRNA-seq", "source_cluster_id": "cluster_10", "replication_status": "independently_replicated", "claim_source_sentence": "To systematically ascertain and learn from these cellular specializations, we used Drop-seq to profile RNA expression in 690,000 individual cells, sampled from nine regions of the adult mouse brain.", "replication_evidence_dois": [ "10.1016/j.celrep.2016.06.059" ], "effect_size_source_sentence": "To systematically ascertain and learn from these cellular specializations, we used Drop-seq to profile RNA expression in 690,000 individual cells, sampled from nine regions of the adult mouse brain." }- source_refs
[ "paper:paper-a5fcb640f059" ]
- evidence_refs
[ { "ref": "paper:paper-a5fcb640f059" } ]- source_policy
{ "mode": "public_source_pointer_with_short_context", "notes": [ "Local review repositories are read-only inputs.", "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose." ], "source_commit_sha": "0632aae8abc141909207fe91f6349b9e36489c3b", "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewLoops" }