Version history

{
  "tick": 153,
  "gap_ref": "GAP-11",
  "preview": "The donor_id namespace crosswalk schema is registered in the substrate (dataset 8a34a7ff), but row-level population is blocked because no registered verb supports authenticated Synapse API fetch or Allen portal donor manifest ingestion. This constitutes a substrate adapter gap, not a scientific gap — the schema is cor…",
  "claim_text": "The donor_id namespace crosswalk schema is registered in the substrate (dataset 8a34a7ff), but row-level population is blocked because no registered verb supports authenticated Synapse API fetch or Allen portal donor manifest ingestion. This constitutes a substrate adapter gap, not a scientific gap — the schema is correct, the data exists externally, and a Synapse read adapter would unblock GAP-11 completion within one additional tick.",
  "created_by": "persona-andy-hickl",
  "evidence_refs": [
    {
      "id": "8a34a7ff-0f6a-4059-8877-bef5f03c3ba9",
      "type": "dataset"
    },
    {
      "id": "036614df-d1a1-4f8d-85e4-5f6ff54aafc3",
      "type": "dataset"
    },
    {
      "id": "96f5a52b-a8c4-413d-99f7-12638954c64c",
      "type": "dataset"
    }
  ],
  "affected_programs": [
    "SEA-AD",
    "ROSMAP",
    "AMP-AD",
    "BICCN"
  ],
  "gap_fields_remaining": [
    "donor_id_namespace_rows",
    "sex_age_normalization",
    "pathology_score_vocabulary"
  ],
  "gap_fields_resolved_draft": [
    "tissue_region_uberon",
    "assay_type_efo"
  ],
  "recommended_platform_action": "Register scidex.forge.synapse_manifest or equivalent read-only Synapse API adapter as a new substrate verb. Minimum capability: fetch specimen metadata table for a given Synapse study ID, return (specimenID, studyName, donor_id, tissue, assay) rows."
}