SciDEX protein designs
Protein designs
23 designs (and growing) — generated computationally and validated experimentally. Each entry carries sequence, target, scoring method, and predicted binding affinity.
23
protein designs
Browsing 23 protein designs.
- protein_design 0.87
TREM2 Variant Design v3 — R186K/D87N/T96I Triple Mutant (Optimized)
Target phospholipid membraneRoseTTAFold + Bayesian optimization + MD simulationSequenceMSLSRAAAQALWLWGGVAAELQTFKGPCDK…R186KD87NT96I - protein_design 0.78
TREM2 Variant Design v2 — R186K/D87N Dual Mutant
Target phospholipid membraneRoseTTAFold + guided mutagenesisSequenceMSLSRAAAQALWLWGGVAAELQTFKGPCDK…R186KD87N - protein_design 0.72
TREM2 Variant Design v1 — Wild-type Reference
Target phospholipid membraneAlphaFold2 structure predictionSequenceMSLSRAAAQALWLWGGVAAELQTFKGPCDK… - protein_design 0.75
TREM2 Ectodomain Variant — AlphaFold Base
Target Aβ oligomersrosetta_interface_designSequenceMEPLRGLLVLAGLAFWHLRGGWAPGALLLW…T96SK186RA192VH157YR62W - protein_design 0.75
TREM2 Ectodomain Variant — AlphaFold Base
Target Aβ oligomersrosetta_relaxSequenceMEPLRGLLVLAGLAFWHLRGGWAPGALLLW…T96SK186RA192V - protein_design 0.75
TREM2 Ectodomain Variant — AlphaFold Base
Target Aβ oligomersalphafoldSequenceMEPLRGLLVLAGLAFWHLRGGWAPGALLLW… - protein_design 0.72
TREM2 Ectodomain Variant — AlphaFold Base
Target Aβ oligomersalphafoldSequenceMEPLRGLLLLLLPLLGLLGPRVTEAQVTYL… - protein_design 0.88
TREM2 Ectodomain Variant — Binding Optimized
Target Aβ oligomersrosetta_interface_designSequenceMEPLRGLLLLLLPLLGLLGPRVTEAQVTYL…T96SK186RA192VH157YR62W - protein_design 0.82
TREM2 Ectodomain Variant — Stability Optimized
Target Aβ oligomersrosetta_relaxSequenceMEPLRGLLLLLLPLLGLLGPRVTEAQVTYL…T96SK186RA192V - protein_design 0.82
TREM2 Ectodomain Variant — Binding Optimized
Target Aβ oligomersrosetta_interface_designSequenceMEPLRPPGAWVLlalllgsaegstceedvd…T96SK186RA192VH157YR62W - protein_design 0.75
TREM2 Ectodomain Variant — Stability Optimized
Target Aβ oligomersrosetta_relaxSequenceMEPLRPPGAWVLlalllgsaegstceedvd…T96SK186RA192V - protein_design 0.70
TREM2 Ectodomain Variant — AlphaFold Base
Target Aβ oligomersalphafoldSequenceMEPLRGPHSLWALALCLLTSAGPGAQKVEV… - protein_design 0.80
TREM2 Ectodomain Variant — AlphaFold Base
Target Aβ oligomersrosetta_relaxSequenceMEPLRGPHSLWALALCLLTSAGPGAQKVEV…T96SK186RA192V - protein_design 0.92
TREM2 Ectodomain Variant — AlphaFold Base
Target Aβ oligomersrosetta_interface_designSequenceMEPLRGPHSLWALALCLLTSAGPGAQKVEV…T96SK186RA192VH157YR62W - protein_design 0.75
TREM2 Ectodomain Variant — AlphaFold Base
Target Aβ oligomersalphafoldSequenceMEPLRPGWLLLVSLAQVALGGPPPGPRPGL… - protein_design 0.82
TREM2 Ectodomain Variant — Stability Optimized
Target Aβ oligomersrosetta_relaxSequenceMEPLRPPHLWAVLLLLGLRLQPRWAGSELQ…T96SK186RA192V - protein_design 0.91
TREM2 Ectodomain Variant — Binding Optimized
Target Aβ oligomersrosetta_interface_designSequenceMEPLRPPHLWAVLLLLGLRLQPRWAGSELQ…T96SK186RA192VH157YR62W - protein_design 0.82
TREM2 Ectodomain Variant — Stability Optimized
Target Aβ oligomersrosetta_relaxSequenceMEPLRPPWHLLLLCLCLLSLLPSGFSTEET…T96SK186RA192V - protein_design 0.88
TREM2 Ectodomain Variant — Binding Optimized
Target Aβ oligomersrosetta_interface_designSequenceMEPLRPPWHLLLLCLCLLSLLPSGFSTEET…T96SK186RA192VH157YR62W - protein_design 0.75
TREM2 Ectodomain Variant — Binding-Optimized
Target Aβ oligomersrosetta_interface_designSequenceMEPLRPGWLLLVSLAQVALGGPPPGPRPGL…T96SK186RA192VH157YR62W - protein_design 0.75
TREM2 Ectodomain Variant — Stability-Optimized
Target Aβ oligomersrosetta_relaxSequenceMEPLRPGWLLLVSLAQVALGGPPPGPRPGL…T96SK186RA192V - protein_design 0.75
TREM2 Ectodomain Variant — AlphaFold Base
Target Aβ oligomersalphafoldSequenceMEPLRPPWHLLLLCLCLLSLLPSGFSTEET… - protein_design 0.88
TREM2 Stabilized Variant
Target DAP12rosettaSequenceMEPLRPRLGLLLLLLPCLLLTGVPAQVTYQ…R47HR62H