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mitochondria to overexpress key enzymes in the SPM biosynthetic pathway
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mitochondria, PINK1 is imported and degraded. In damaged mitochondria with
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Mitochondria serve as critical platforms for this secondary activation, with
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mitochondria from neuroprotective A2 astrocytes to dysfunctional A1 astrocytes. MIRO1
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mitochondria - **ULK1**: Initiates autophagy for energy mobilization Astrocytes express high
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mitochondria. Calpain activation is consistently associated with necrotic and apoptotic
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mitochondria to mPTP opening. [PMID:25478730]. 3. tBid translocates to mitochondria
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Generate reviewed cross-disease analogy hypotheses from hypothesis:hypothesis-h-0e614ae4 and persist valuable results through substrate APIs.
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Generate reviewed cross-disease analogy hypotheses from hypothesis:hypothesis-h-22d2cfcd and persist valuable results through substrate APIs.
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Generate reviewed cross-disease analogy hypotheses from hypothesis:hypothesis-h-26b9f3e7 and persist valuable results through substrate APIs.
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Generate reviewed cross-disease analogy hypotheses from hypothesis:hypothesis-h-6726853448 and persist valuable results through substrate APIs.
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Generate reviewed cross-disease analogy hypotheses from hypothesis:hypothesis-h-e3e8407c and persist valuable results through substrate APIs.
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Generate reviewed cross-disease analogy hypotheses from hypothesis:hypothesis-h-var-6957745fea and persist valuable results through substrate APIs.
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Generate reviewed cross-disease analogy hypotheses from hypothesis:hypothesis-hyp-lyso-snca-c9e088045c26 and persist valuable results through substrate APIs.
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mitochondria. Under physiological conditions, PINK1 accumulates on the outer membrane
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mitochondria and decreased recruitment of autophagy machinery as quantified by LC3-mitochondria
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mitochondria from Alzheimer's patients) demonstrate that mitochondrial dysfunction precedes
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- Hypothesis SIRT3-Mediated Mitochondrial Deacetylation Failure with PINK1/Parkin Mitophagy Dysfunction
mitochondria for autophagic degradation. PINK1 (PTEN-induced kinase 1) accumulates
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mitochondria, with diameters ranging from 0.5-1.0 micrometers, are orders
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mitochondria via the TOM/TIM complex, where it undergoes proteolytic cleavage
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mitochondria to the kinesin-1 motor complex through direct interactions
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mitochondria to microtubules via kinesin and dynein motor proteins. The process
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Design a research-only SS-31-like peptide candidate that may stabilize cardiolipin-rich mitochondrial inner membranes. Context: - This is for SciDEX v2 beta testing and should be treated as a hypothesis-generating artifact, not medical advice or a therapeutic recommendation. - SS-31/elamipretide evidence to consider: - PMID 23813215 / DOI 10.1681/ASN.2012121216: SS-31 interacts with cardiolipin and protects cristae in an ischemia model. - PMID 32273339 / DOI 10.1074/jbc.RA119.012094: SS-31 binds lipid bilayers and modulates surface electrostatics. - PMID 35913044 / DOI 10.7554/eLife.75531: tetrapeptide structure-activity relationships for alternating aromatic/cationic mitochondrial compounds. - PubChem CID 11764719: elamipretide molecular metadata. Create these files in the current workspace: - lab_notes.md: intermediate notes, assumptions, source refs, rejected alternatives, risks, assay ideas. - design_description.md: description of the proposed peptide artifact. - descriptor_score.py: small deterministic descriptor/scoring script for aromatic/cationic balance, sequence length, and flags. - manifest.json: machine-readable summary with candidate id, canonical sequence surrogate, modified sequence notation, sources, and next experiments. Candidate constraints: - Prefer a short SS-31-like aromatic-cationic peptidomimetic. - Use a canonical amino-acid surrogate sequence that can fit a SciDEX protein_design artifact. - Make uncertainty explicit. - Avoid dosing, administration instructions, or claims of efficacy. Return a concise summary and list all files created.
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mitochondria to the nuclear compartment, thereby influencing epigenetic programming relevant
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mitochondria through several mechanisms including tunneling nanotubes (TNTs), extracellular vesicles
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mitochondria, PRKN remains cytosolic and inactive through autoinhibitory interactions between
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mitochondria-associated membranes (MAMs), where the endoplasmic reticulum (ER) and mitochondria
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- Hypothesis GAP43-mediated tunneling nanotube stabilization enhances neuroprotective mitochondrial transfer
mitochondria to co-cultured neurons at rates 280% higher than
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mitochondria that serve as danger signals for NLRP3 inflammasome activation
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mitochondria preferentially uses mitochondria-generated ATP (rather than cytoplasmic ATP) for glycolysis
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