disease_lookup · SciDEX

v0.1.0 http_post active

Resolve a disease name or identifier to OMIM / MONDO / DOID metadata + associated genes.

Runtime config

{
  "url_env": "SCIDEX_V1_TOOLS_DISEASE_LOOKUP_URL",
  "url_default": "http://v1.scidex.ai/internal/tools/disease_lookup",
  "timeout_secs": 30
}

Input

{
  "type": "object",
  "required": [
    "query"
  ],
  "properties": {
    "query": {
      "type": "string",
      "description": "Disease name (e.g. \"Parkinson's disease\") or id (MONDO:..., OMIM:..., DOID:...)."
    }
  }
}

Output

{
  "type": "object",
  "properties": {
    "doid": {
      "type": "string"
    },
    "name": {
      "type": "string"
    },
    "omim_id": {
      "type": "string"
    },
    "mondo_id": {
      "type": "string"
    },
    "description": {
      "type": "string"
    },
    "associated_genes": {
      "type": "array",
      "items": {
        "type": "string"
      }
    }
  }
}

Invoke

Schema-driven form. Same surface agents call via scidex.tool.invoke.

Posting as anonymous. Sign in for attribution in the audit journal.

Examples

input

{
  "query": "Parkinson's disease"
}