Details

kind
infographic
prompt
VTA dopamine neuron cellular composition and projection diversity
provider
other
section_id
section_02_evidence
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewNeuromodulation/blob/95db5c630fe54e183d9c452cf826ce502d4a872d/evidence/section_02_evidence.json
target_ref
wiki_page:computationalreviewneuromodulation-02
review_repo
ComputationalReviewNeuromodulation
section_ref
wiki_page:computationalreviewneuromodulation-02
source_path
evidence/section_02_evidence.json
section_title
Neuromodulatory Systems: Origins, Projections, and Brain-Wide Architecture
generation_status
complete
review_bundle_ref
analysis_bundle:ab-a3dbbaf9b625
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewNeuromodulation/blob/95db5c630fe54e183d9c452cf826ce502d4a872d/evidence/section_02_evidence.json
commit_sha
95db5c630fe54e183d9c452cf826ce502d4a872d
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewNeuromodulation
Raw fields (3)
raw_fields
{
  "title": "VTA dopamine neuron cellular composition and projection diversity",
  "papers": [
    {
      "doi": "10.3389/fncir.2021.799688",
      "value": "DA cells comprise roughly 50% of VTA neurons",
      "n_analyzed": null,
      "n_definition": "review estimate",
      "scope_region": "VTA",
      "taxonomic_level": "cell-type level (DA vs non-DA)",
      "scope_population": "all VTA neurons",
      "value_source_sentence": "We now know that the VTA is comprised of heterogenous cell types: DA cells comprise roughly 50% of VTA neurons"
    },
    {
      "doi": "10.1016/j.addicn.2024.100183",
      "value": "TPH2-expressing neurons in caudal VTA represented 3% of neurons",
      "n_analyzed": null,
      "n_definition": "proportion of neurons at specific bregma level",
      "scope_region": "caudal VTA",
      "taxonomic_level": "molecular subtype (TPH2+)",
      "scope_population": "TPH2+ (serotonergic) neurons in VTA",
      "value_source_sentence": "Sparse TPH2 expression in the caudal VTA began around Bregma −3.6 mm, where they represented 3 % of all neurons"
    },
    {
      "doi": "10.1038/s41380-024-02608-3",
      "value": "In striatum, DA arborization leads to dense innervation with ~3% of striatal volume occupied by DA axons",
      "n_analyzed": null,
      "n_definition": "estimated volume fraction",
      "scope_region": "striatum",
      "taxonomic_level": "system level (dopaminergic)",
      "scope_population": "dopaminergic axons from SNc/VTA",
      "value_source_sentence": "In the striatum, massive arborization leads to dense innervation with an estimated ~3% of the striatal volume occupied by dopamine axons"
    }
  ],
  "description": "Quantitative data on VTA cell-type composition and projection target diversity from multiple studies",
  "figure_type": "regional_heatmap",
  "homogeneity_check": "Studies use different quantification methods (cell counting, immunohistochemistry, volume estimation). The 50% DA composition of VTA is a widely cited estimate but varies with exact VTA boundary definitions. Volume fraction of DA axons in striatum comes from electron microscopy estimates that are methodologically distinct from cell counting approaches."
}
source_refs
[
  "paper:paper-267b10208bd4",
  "paper:paper-85169a10940a",
  "paper:paper-bca750a30c03"
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "95db5c630fe54e183d9c452cf826ce502d4a872d",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewNeuromodulation"
}

Voting as anonymous. Sign in to attribute your signals.

tokens

Replication

No replications yet

Discussion

Posting anonymously. Sign in for attribution.

No comments yet — be the first.