Details

kind
infographic
prompt
Modeling Inhibitory Diversity figure 1
provider
other
section_id
section_12_evidence
source_url
https://github.com/AllenNeuralDynamics/ComputationReviewInhibitory/blob/934e0675cc6d5ffd9978a4a9883b31166ce000e2/evidence/section_12_evidence.json
target_ref
wiki_page:computationreviewinhibitory-12
review_repo
ComputationReviewInhibitory
section_ref
wiki_page:computationreviewinhibitory-12
source_path
evidence/section_12_evidence.json
section_title
Modeling Inhibitory Diversity
generation_status
complete
review_bundle_ref
analysis_bundle:ab-5fc3c0c0505b
origin_url
https://github.com/AllenNeuralDynamics/ComputationReviewInhibitory/blob/934e0675cc6d5ffd9978a4a9883b31166ce000e2/evidence/section_12_evidence.json
commit_sha
934e0675cc6d5ffd9978a4a9883b31166ce000e2
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationReviewInhibitory
Raw fields (3)
raw_fields
{
  "papers": [
    {
      "doi": "10.1371/journal.pcbi.1013465",
      "value": "2",
      "cite_key": null,
      "model_type": "single_I",
      "value_unit": "populations",
      "scope_region": "generic cortex",
      "scope_population": "rate-based populations",
      "phenomena_explained": "gamma oscillations, E-I balance, gain control",
      "value_source_sentence": "The classical two-population model consisting of one excitatory and one inhibitory population captures balanced E/I activity."
    },
    {
      "doi": "10.1073/pnas.1700080115",
      "value": "2-3",
      "cite_key": "Kraynyukova2018",
      "model_type": "ISN/SSN",
      "value_unit": "populations with nonlinear transfer",
      "scope_region": "V1",
      "scope_population": "supralinear rate populations",
      "phenomena_explained": "surround suppression, normalization, paradoxical response, contrast gain",
      "value_source_sentence": "Here, we show that the stabilized supralinear network (SSN) model, which was originally proposed for sensory integration phenomena such as contrast invariance, normalization, and surround suppression, can give rise to dynamic cortical features of working memory, persistent activity, and rhythm gener"
    },
    {
      "doi": "10.1152/jn.00732.2015",
      "value": "3",
      "cite_key": "Litwin-Kumar2016",
      "model_type": "three_population",
      "value_unit": "populations (E-PV-SST)",
      "scope_region": "V1/cortex",
      "scope_population": "E, PV, SST populations",
      "phenomena_explained": "gain modulation, divisive normalization, activity-dependent plasticity, surround suppression, orientation selectivity",
      "value_source_sentence": "We study the dynamics of recurrent excitatory-inhibitory model cortical networks with parvalbumin (PV)-, somatostatin (SOM)-, and vasointestinal peptide-expressing (VIP) interneurons, with connectivity properties motivated by experimental recordings from mouse primary visual cortex."
    },
    {
      "doi": "10.1016/j.neuron.2024.02.008",
      "value": "4",
      "cite_key": "Piet2024",
      "model_type": "four_population",
      "value_unit": "populations (E-PV-SST-VIP)",
      "scope_region": "cortex",
      "scope_population": "E, PV, SST, VIP populations",
      "phenomena_explained": "disinhibition, top-down attention, context-dependent gain, state-dependent processing",
      "value_source_sentence": "We find that the diversity of neural correlates of strategy can be understood parsimoniously as the increased activation of the Vip-Sst disinhibitory circuit during the visual comparison strategy, which facilitates task-appropriate responses."
    }
  ],
  "description": "Comparison of model complexity levels and the phenomena they can explain, from single inhibitory population models through ISN/SSN to multi-type (E-PV-SST-VIP) models",
  "n_definition": "number of cell populations in model",
  "comparison_type": "model_complexity_progression",
  "taxonomic_level": "N/A - model comparison",
  "comparison_title": "Model complexity vs. explanatory power: From single-I to four-population models",
  "homogeneity_check": "Models differ fundamentally in their level of abstraction. Comparison is conceptual rather than quantitative — the \"value\" is the number of distinct populations, which determines the space of phenomena each model can address."
}
source_refs
[
  "paper:paper-5989bc007d71",
  "paper:paper-8f25714ab7fe",
  "paper:paper-9f08cc63cc18",
  "paper:pmid:38447579"
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "934e0675cc6d5ffd9978a4a9883b31166ce000e2",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationReviewInhibitory"
}

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