GABAergic Neurons — Cell Type Hierarchy

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Overview

GABAergic Neurons — Cell Type Hierarchy
Cell Ontology ID Cell Type
[CL:0000617](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0000617) GABAergic neuron
[CL:0008061](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0008061)     GABA-Chol neuron
[CL:4310083](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310083)         GPin-BF cholinergic-GABAergic neuron (Primate)
[CL:4042015](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4042015)         VIP-ChAT interneuron
[CL:0020007](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0020007)         dorso-striatal cholinergic-GABAergic neuron
[CL:4310128](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310128)             STRd cholinergic-GABAergic neuron (Primate)
[CL:0004232](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0004232)         starburst amacrine cell
[CL:0020008](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0020008)         striatal cholinergic-GABAergic neuron
[CL:4310135](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310135)             STR cholinergic-GABAergic neuron (Primate)
[CL:0008060](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0008060)     GABA-Glut neuron
[CL:4072006](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4072006)         A9 dopaminergic neuron
[CL:0011106](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0011106)         GABAnergic interplexiform cell
[CL:0008059](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0008059)     GABA-Gly neuron
[CL:4300348](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4300348)         DCO Il22 Gly-Gaba cerebellar neuron (Mmus)
[CL:4301571](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4301571)             DCO Il22 Gly-Gaba_1 cerebellar neuron (Mmus)
[CL:4306992](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4306992)             DCO Il22 Gly-Gaba_2 cerebellar neuron (Mmus)
[CL:4301573](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4301573)             DCO Il22 Gly-Gaba_3 cerebellar neuron (Mmus)
[CL:0011006](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0011006)         Lugaro cell
[CL:4301575](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4301575)             Lugaro cell (Mmus)
[CL:4023160](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023160)         cartwheel cell
[CL:4033091](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4033091)         glycinergic-GABAergic amacrine cell
[CL:0011005](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0011005)     GABAergic interneuron
[CL:4072013](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4072013)         A16 dopaminergic neuron
[CL:4310145](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310145)         AMY-SLEA-BNST D1 GABA GABAergic interneuron (Primate)
[CL:4310146](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310146)         AMY-SLEA-BNST GABA GABAergic interneuron (Primate)
[CL:4030027](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4030027)         GABAergic amacrine cell
[CL:0004235](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0004235)             AB broad diffuse-1 amacrine cell
[CL:0004236](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0004236)             AB broad diffuse-2 amacrine cell
[CL:0004237](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0004237)             fountain amacrine cell
[CL:0004245](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0004245)             indoleamine-accumulating amacrine cell
[CL:4310100](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310100)         GPe-NDB-SI LHX6-LHX8-GBX1 GABA GABAergic interneuron (Primate)
[CL:0005007](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0005007)         Kolmer-Agduhr neuron
[CL:4023076](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023076)         Martinotti neuron
[CL:4023031](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023031)             L4 sst Martinotti interneuron (Mmus)
[CL:4023086](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023086)             T Martinotti neuron
[CL:4023087](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023087)             fan Martinotti neuron
[CL:4072016](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4072016)         NPY interneuron
[CL:4310110](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310110)         SN EBF2 GABA GABAergic interneuron (Primate)
[CL:4310112](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310112)         SN GATA3-PAX8 GABA GABAergic interneuron (Primate)
[CL:4310114](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310114)         SN SEMA5A GABA GABAergic interneuron (Primate)
[CL:4310117](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310117)         SN-VTR-HTH GATA3-TCF7L2 GABA GABAergic interneuron (Primate)
[CL:4042001](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4042001)         TAC3-positive striatal interneuron
[CL:4310125](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310125)             STR TAC3-PLPP4 GABA TAC3-positive striatal interneuron (Primate)
[CL:4310126](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310126)             STR-BF TAC3-PLPP4-LHX8 GABA TAC3-positive striatal interneuron (Primate)
[CL:4310143](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310143)         ZI-HTH GABA GABAergic interneuron (Primate)
[CL:0000118](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0000118)         basket cell
[CL:2000088](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_2000088)             Ammon's horn basket cell
[CL:2000027](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_2000027)             cerebellar basket cell
[CL:2000087](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_2000087)             dentate gyrus of hippocampal formation basket cell
[CL:2000086](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_2000086)             neocortex basket cell
[CL:4023057](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023057)         cerebellar inhibitory GABAergic interneuron
[CL:4072102](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4072102)             Purkinje layer interneuron
[CL:0000119](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0000119)             cerebellar Golgi cell
[CL:4042035](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4042035)             molecular layer interneuron
[CL:0010011](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0010011)         cerebral cortex GABAergic interneuron
[CL:4023030](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023030)             L2/3/5 fan Martinotti sst GABAergic interneuron (Mmus)
[CL:4023028](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023028)             L5 non-Martinotti sst GABAergic interneuron (Mmus)
[CL:4023027](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023027)             L5 sst T-Martinotti interneuron (Mmus)
[CL:4023071](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023071)             L5/6 cck GABAergic interneuron (Mmus)
[CL:4023118](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023118)             L5/6 non-Martinotti sst GABAergic interneuron (Mmus)
[CL:4023075](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023075)             L6 th sst GABAergic interneuron (Mmus)
[CL:4023010](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023010)             alpha7 GABAergic cortical interneuron (Mmus)
[CL:4023064](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023064)             caudal ganglionic eminence derived interneuron
[CL:4023069](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023069)             medial ganglionic eminence derived GABAergic interneuron
[CL:4023122](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023122)             oxytocin receptor sst GABAergic cortical interneuron
[CL:4032001](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4032001)             reelin GABAergic cortical interneuron
[CL:0008032](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0008032)             rosehip neuron
[CL:4023018](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023018)         pvalb GABAergic interneuron
[CL:4072029](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4072029)             pvalb GABAergic interneuron (Homo sapiens)
[CL:4310121](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310121)         striatal SST-LYPD6-RSPO2 GABAergic interneuron (Primate)
[CL:4042023](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4042023)         striatal pthlh-expressing interneuron
[CL:4042024](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4042024)             striatal PTHLH MOXD1 expressing interneuron
[CL:4310120](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310120)             striatal pthlh-expressing interneuron (Primate)
[CL:4030053](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4030053)     Islands of Calleja granule cell
[CL:4310104](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310104)         Islands of Calleja granule cell (Primate)
[CL:0020006](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0020006)     OB-Dopa-GABA
[CL:4310147](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310147)         OB Dopa-GABA neuron (Primate)
[CL:0000121](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0000121)     Purkinje cell
[CL:4300353](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4300353)         Purkinje cell (Mmus)
[CL:4301582](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4301582)             CBX Purkinje Gaba_1 Purkinje cell (Mmus)
[CL:4301583](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4301583)             CBX Purkinje Gaba_2 Purkinje cell (Mmus)
[CL:4072017](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4072017)     agouti-related protein expressing neuron
[CL:0020010](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0020010)     arkypallidal neuron
[CL:4310093](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310093)         arkypallidal neuron (Primate)
[CL:4300028](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4300028)     cerebellar GABAergic neuron (Mmus)
[CL:4307012](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4307012)         CBX MLI Cdh22 Gaba molecular layer interneuron (Mmus)
[CL:4300351](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4300351)         CBX MLI Megf11 Gaba molecular layer interneuron (Mmus)
[CL:4301579](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4301579)             CBX MLI Megf11 Gaba_1 molecular layer interneuron (Mmus)
[CL:4301580](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4301580)             CBX MLI Megf11 Gaba_2 molecular layer interneuron (Mmus)
[CL:4300349](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4300349)         Purkinje layer interneuron (Mmus)
[CL:4307005](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4307005)             CB PLI GABA Ly6d Purkinje layer interneuron
[CL:4301574](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4301574)             CB PLI Gly-Gaba_1 Purkinje layer interneuron (Mmus)
[CL:4301576](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4301576)             CB PLI Gly-Gaba_3 Purkinje layer interneuron (Mmus)
[CL:4301578](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4301578)         cerebellar Golgi cell (Mmus)
[CL:0020003](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0020003)     internal globus pallidus core projecting neuron
[CL:4310095](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310095)         GPi Core neuron (Primate)
[CL:0020004](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0020004)     internal globus pallidus shell projection neuron
[CL:4310096](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310096)         GPi Shell neuron (Primate)
[CL:1001474](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_1001474)     medium spiny neuron
[CL:4030054](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4030054)         D1-NUDAP medium spiny neuron
[CL:4310137](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310137)             STRv D1-NUDAP medium spiny neuron (Primate)
[CL:4030050](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4030050)         D1/D2-hybrid medium spiny neuron
[CL:4023026](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023026)         direct pathway medium spiny neuron
[CL:4300101](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4300101)             STR D1 Gaba direct pathway medium spiny neuron (Mmus)
[CL:4030043](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4030043)             matrix D1 medium spiny neuron
[CL:4030048](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4030048)             striosomal D1 medium spiny neuron
[CL:4030057](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4030057)         eccentric medium spiny neuron
[CL:4023029](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023029)         indirect pathway medium spiny neuron
[CL:4300102](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4300102)             STR D2 Gaba indirect pathway medium spiny neuron (Mmus)
[CL:4030047](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4030047)             matrix D2 medium spiny neuron
[CL:4030049](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4030049)             striosomal D2 medium spiny neuron
[CL:4030051](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4030051)         nucleus accumbens shell and olfactory tubercle D1 medium spiny neuron
[CL:4310136](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310136)             STRv D1 medium spiny neuron (Primate)
[CL:4042002](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4042002)             TAC3-positive medium spiny neuron
[CL:4030052](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4030052)         nucleus accumbens shell and olfactory tubercle D2 medium spiny neuron
[CL:4310138](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310138)             STRv D2 medium spiny neuron (Primate)
[CL:4023065](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4023065)     meis2 expressing cortical GABAergic cell
[CL:0020009](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_0020009)     prototypic neuron
[CL:4310094](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4310094)         prototypic neuron (Primate)
[CL:4042037](https://www.ebi.ac.uk/ols4/ontologies/cl/classes/http%253A%252F%252Fpurl.obolibrary.org%252Fobo%252FCL_4042037)     sst GABAergic neuron of the striatum

GABAergic Neurons — Cell Type Hierarchy describes a neural cell population with specific vulnerability or functional significance in neurodegenerative disease. This page covers cell morphology, molecular markers, connectivity, and disease-specific pathological changes.

Inhibitory GABAergic neuron subtypes including interneurons, Purkinje cells, and medium spiny neurons.

This page provides a navigable hierarchy of GABAergic neuron (CL:0000617) from the Cell Ontology, cross-referenced with NeuroWiki cell type pages.

Coverage: 42/120 types have NeuroWiki pages (35%)

Hierarchy Diagram

flowchart TD
    CL_0000617["GABAergic neuron"]
    click CL_0000617 "/cell-types/basal-forebrain-gaba-neurons" _blank
    CL_0008061["GABA-Chol neuron"]
    CL_0000617  -->  CL_0008061
    CL_4310083["Pin-BF cholinergic-GABAergic neuron (Primate)"]
    CL_0008061  -->  CL_4310083
    CL_4042015["VIP-ChAT interneuron"]
    CL_0008061  -->  CL_4042015
    CL_0020007["dorso-striatal cholinergic-GABAergic neuron"]
    CL_0008061  -->  CL_0020007
    CL_4310128["Rd cholinergic-GABAergic neuron (Primate)"]
    CL_0020007  -->  CL_4310128
    CL_0004232["starburst amacrine cell"]
    click CL_0004232 "/cell-types/starburst-amacrine-cells" _blank
    CL_0008061  -->  CL_0004232
    CL_0020008["striatal cholinergic-GABAergic neuron"]
    CL_0008061  -->  CL_0020008
    CL_4310135["STR cholinergic-GABAergic neuron (Primate)"]
    CL_0020008  -->  CL_4310135
    CL_0008060["GABA-Glut neuron"]
    click CL_0008060 "/cell-types/ventral-tegmental-area-gaba-neurons" _blank
    CL_0000617  -->  CL_0008060
    CL_4072006["A9 dopaminergic neuron"]
    click CL_4072006 "/cell-types/nigral-glia" _blank
    CL_0008060  -->  CL_4072006
    CL_0011106["GABAnergic interplexiform cell"]
    CL_0008060  -->  CL_0011106
    CL_0008059["GABA-Gly neuron"]
    click CL_0008059 "/cell-types/ventral-tegmental-area-gaba-neurons" _blank
    CL_0000617  -->  CL_0008059
    CL_4300348["DCO Il22 Gly-Gaba cerebellar neuron (Mmus)"]
    CL_0008059  -->  CL_4300348
    CL_4301571["DCO Il22 Gly-Gaba_1 cerebellar neuron (Mmus)"]
    CL_4300348  -->  CL_4301571
    CL_4306992["DCO Il22 Gly-Gaba_2 cerebellar neuron (Mmus)"]
    CL_4300348  -->  CL_4306992
    CL_4301573["DCO Il22 Gly-Gaba_3 cerebellar neuron (Mmus)"]
    CL_4300348  -->  CL_4301573
    CL_0011006["Lugaro cell"]
    click CL_0011006 "/cell-types/cerebellar-lugaro-cells" _blank
    CL_0008059  -->  CL_0011006
    CL_4301575["Lugaro cell (Mmus)"]
    click CL_4301575 "/cell-types/cerebellar-lugaro-cells" _blank
    CL_0011006  -->  CL_4301575
    CL_4023160["cartwheel cell"]
    CL_0008059  -->  CL_4023160
    CL_4033091["glycinergic-GABAergic amacrine cell"]
    CL_0008059  -->  CL_4033091
    CL_0011005["GABAergic interneuron"]
    CL_0000617  -->  CL_0011005
    CL_4072013["A16 dopaminergic neuron"]
    CL_0011005  -->  CL_4072013
    CL_4310145["AMY-SLEA-BNST D1 GABA GABAergic interneuron (Primate)"]
    CL_0011005  -->  CL_4310145
    CL_4310146["AMY-SLEA-BNST GABA GABAergic interneuron (Primate)"]
    CL_0011005  -->  CL_4310146
    CL_4030027["GABAergic amacrine cell"]
    CL_0011005  -->  CL_4030027
    CL_0004235["AB broad diffuse-1 amacrine cell"]
    CL_4030027  -->  CL_0004235
    CL_0004236["AB broad diffuse-2 amacrine cell"]
    CL_4030027  -->  CL_0004236
    CL_0004237["fountain amacrine cell"]
    CL_4030027  -->  CL_0004237
    CL_0004245["indoleamine-accumulating amacrine cell"]
    CL_4030027  -->  CL_0004245
    CL_4310100["Pe-NDB-SI LHX6-LHX8-GBX1 GABA GABAergic interneuron (Primate)"]
    CL_0011005  -->  CL_4310100
    CL_0005007["Kolmer-Agduhr neuron"]
    CL_0011005  -->  CL_0005007
    CL_4023076["Martinotti neuron"]
    click CL_4023076 "/cell-types/cortical-martinotti-cells" _blank
    CL_0011005  -->  CL_4023076
    CL_4023031["L4 sst Martinotti interneuron (Mmus)"]
    click CL_4023031 "/cell-types/cortical-sst-detector-cells" _blank
    CL_4023076  -->  CL_4023031
    CL_4023086["T Martinotti neuron"]
    CL_4023076  -->  CL_4023086
    CL_4023087["fan Martinotti neuron"]
    CL_4023076  -->  CL_4023087
    CL_4072016["NPY interneuron"]
    CL_0011005  -->  CL_4072016
    CL_4310110["SN EBF2 GABA GABAergic interneuron (Primate)"]
    CL_0011005  -->  CL_4310110
    CL_4310112["SN GATA3-PAX8 GABA GABAergic interneuron (Primate)"]
    CL_0011005  -->  CL_4310112
    CL_4310114["SN SEMA5A GABA GABAergic interneuron (Primate)"]
    CL_0011005  -->  CL_4310114
    CL_4310117["SN-VTR-HTH GATA3-TCF7L2 GABA GABAergic interneuron (Primate)"]
    CL_0011005  -->  CL_4310117
    CL_4042001["TAC3-positive striatal interneuron"]
    CL_0011005  -->  CL_4042001
    CL_4310125["STR TAC3-PLPP4 GABA TAC3-positive striatal interneuron (Primate)"]
    CL_4042001  -->  CL_4310125
    CL_4310126["STR-BF TAC3-PLPP4-LHX8 GABA TAC3-positive striatal interneuron (Primate)"]
    CL_4042001  -->  CL_4310126
    CL_4310143["ZI-HTH GABA GABAergic interneuron (Primate)"]
    CL_0011005  -->  CL_4310143
    CL_0000118["basket cell"]
    click CL_0000118 "/cell-types/basket-cells" _blank
    CL_0011005  -->  CL_0000118
    CL_2000088["Ammon's horn basket cell"]
    CL_0000118  -->  CL_2000088
    CL_2000027["cerebellar basket cell"]
    click CL_2000027 "/cell-types/basket-cells" _blank
    CL_0000118  -->  CL_2000027
    CL_2000087["dentate gyrus of hippocampal formation basket cell"]
    click CL_2000087 "/cell-types/dentate-cerebellar-nucleus" _blank
    CL_0000118  -->  CL_2000087
    CL_2000086["neocortex basket cell"]
    CL_0000118  -->  CL_2000086
    style CL_0000617,CL_0004232,CL_0008060,CL_4072006,CL_0008059,CL_0011006,CL_4301575,CL_4023076,CL_4023031,CL_0000118,CL_2000027,CL_2000087 fill:#0a1f0a,stroke:#2e7d32

Green nodes link to existing NeuroWiki pages. Click a node to navigate to it.

Complete Type Listing

About This Hierarchy

This hierarchy is derived from the Cell Ontology (CL), a structured ontology for cell types maintained by the OBO Foundry. Cell Ontology IDs (e.g., CL:0000617) provide a standardized vocabulary for describing cell types across species and experimental contexts.

How Mappings Are Made

NeuroWiki cell type pages are mapped to Cell Ontology terms using a combination of:

  1. Exact name matching — page title matches CL term name or synonym

  2. Fuzzy matching — normalized names match after removing region/disease qualifiers

  3. Manual curation — expert review of ambiguous mappings

Confidence levels: Exact (1.0), High (0.9+), Medium (0.7+), Low (0.5+), Tentative (<0.5)

See Also

  • GABA Receptors — GABA-A and GABA-B receptor families

  • GAD1 Gene — GABA synthesis enzyme

  • [VGAT ( SLC32A1 )slc32a1) — Vesicular GABA transporter

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