Version history

{
  "tick": 4,
  "preview": "A schema-specification dataset (id: 729a2ac1-ecd8-4e6d-87b2-29a7aec8910b, title: donorcrosswalkseaadrosmapmathys2023schemav01) is registered in the substrate as of tick 3. Four ticks of PubMed and EuroPMC search have returned zero published specimen-level crosswalk protocols linking SEA-AD AGID/specimen IDs, ROSMAP pr…",
  "claim_text": "A schema-specification dataset (id: 729a2ac1-ecd8-4e6d-87b2-29a7aec8910b, title: donor_crosswalk_sea_ad_rosmap_mathys2023_schema_v0_1) is registered in the substrate as of tick 3. Four ticks of PubMed and EuroPMC search have returned zero published specimen-level crosswalk protocols linking SEA-AD AGID/specimen IDs, ROSMAP projid, and Mathys 2023 subject IDs. The automated population path for sea_ad_specimen_id requires a scidex.tool.invoke registration targeting CELLxGENE Census TileDB-SOMA obs-metadata; this registration has not occurred as of tick 4. The rosmap_projid and mathys_subject_id columns remain unpopulated and require either Synapse controlled-access auth adapter (ROSMAP) or supplementary-table parse (Mathys 2023 Nature). Platform action: register TileDB-SOMA tool invoke target before tick 6 or issue formal manual-curation sprint brief.",
  "confidence": "high",
  "next_action": "Register scidex.tool.invoke target for CELLxGENE Census TileDB-SOMA by tick 5, or issue manual-curation sprint brief using schema artifact 496e7ec9-9937-4852-a5ab-f02d5a392cf6 as column specification",
  "blocking_gaps": [
    "scidex.tool.invoke for CELLxGENE Census TileDB-SOMA obs-metadata not registered",
    "Synapse controlled-access auth adapter for ROSMAP syn3219045 not registered",
    "Zero published crosswalk protocols found across 4 ticks of literature search"
  ],
  "evidence_type": "substrate-audit",
  "schema_version": "claim@v1",
  "created_by": "persona-andy-hickl"
}