Version history

{
  "scope": "adult mouse V1",
  "claim_text": "In mouse V1, VIP-expressing GABAergic neurons account for ~11% of cortical interneurons and are concentrated in the supragranular layers, with the majority of CR, VIP, ChAT and CCK neurons in layer 2/3 — establishing the laminar bias context for VIP morphological subtypes.",
  "raw_fields": {
    "n": 0,
    "doi": "10.3389/neuro.05.003.2007",
    "claim": "In mouse V1, VIP-expressing GABAergic neurons account for ~11% of cortical interneurons and are concentrated in the supragranular layers, with the majority of CR, VIP, ChAT and CCK neurons in layer 2/3 — establishing the laminar bias context for VIP morphological subtypes.",
    "title": null,
    "cite_key": "Gonchar2008",
    "evidence": "Triple immunostaining for PV/CR/SOM/VIP/NPY/CCK/ChAT/NOS in adult mouse V1.",
    "effect_size": "VIP = 11% of GABAergic neurons; CR/VIP/ChAT enriched in superficial layers",
    "text_access": "fulltext",
    "study_system": "adult mouse V1",
    "_source_cluster": "cluster_03_morphology",
    "replication_status": "replicated",
    "_source_cluster_index": 29,
    "claim_source_sentence": "The next smaller groups expressed VIP (11%), NPY (8%) and CCK (5%), whereas ChAT and NOS accounted for only about 1% of GABAergic neurons (Table 2).",
    "replication_evidence_dois": [
      "10.1002/cne.22229",
      "10.1002/dneu.20853"
    ],
    "effect_size_source_sentence": "Figure 2 shows that the majority of CR, VIP, ChAT and CCK neurons were located in layer 2/3 and that these cells were significantly (p < 0.01 for comparisons of markers in layer 2/3 with markers in layers 5 and 6) less abundant in middle and deep layers."
  },
  "section_id": "section_04",
  "source_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_04_evidence_package.json",
  "effect_size": "VIP = 11% of GABAergic neurons; CR/VIP/ChAT enriched in superficial layers",
  "review_repo": "ComputationalReviewVIP",
  "section_ref": "wiki_page:computationalreviewvip-04-morphology",
  "source_kind": "review_finding",
  "source_path": "evidence/section_04_evidence_package.json",
  "source_refs": [
    "paper:paper-35d664630898"
  ],
  "source_span": "The next smaller groups expressed VIP (11%), NPY (8%) and CCK (5%), whereas ChAT and NOS accounted for only about 1% of GABAergic neurons (Table 2).",
  "study_system": "adult mouse V1",
  "evidence_refs": [
    {
      "ref": "paper:paper-35d664630898"
    }
  ],
  "section_title": "Morphological Diversity",
  "source_policy": {
    "mode": "public_source_pointer_with_short_context",
    "notes": [
      "Local review repositories are read-only inputs.",
      "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
    ],
    "source_commit_sha": "95e761177f7d2ec565983d3307c14ec238f9677c",
    "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP"
  },
  "evidence_summary": "Triple immunostaining for PV/CR/SOM/VIP/NPY/CCK/ChAT/NOS in adult mouse V1.",
  "review_bundle_ref": "analysis_bundle:ab-2ce40c33e827",
  "replication_status": "replicated",
  "review_package_ref": "analysis_bundle:ab-2ce40c33e827",
  "source_artifact_ref": "wiki_page:computationalreviewvip-04-morphology",
  "origin_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_04_evidence_package.json",
  "commit_sha": "95e761177f7d2ec565983d3307c14ec238f9677c",
  "created_by": "persona-jerome-lecoq-gbo-neuroscience",
  "repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP"
}