Details
- scope
- mouse isocortex and hippocampal formation
- claim_text
- The mouse isocortex and hippocampal formation contain a Pvalb subclass that divides into 3 supertypes, including a hippocampus-specific Pvalb chandelier cell cluster with unique markers Ntf3 and Sntb1.
- section_id
- section_02_evidence_package
- source_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewPV/blob/df9fc7e8d455b084152c9d713558dae0013cef21/evidence/section_02_evidence_package.json
- effect_size
- ~1.3 million cells profiled; Pvalb divided into 3 supertypes
- review_repo
- ComputationalReviewPV
- section_ref
- wiki_page:computationalreviewpv-02
- source_kind
- review_finding
- source_path
- evidence/section_02_evidence_package.json
- source_span
- the Sst and Pvalb subclasses are divided into 11 and 3 supertypes, respectively. We also identified a HIP-specific Pvalb chandelier cell cluster #122 with unique markers Ntf3 and Sntb1.
- study_system
- mouse isocortex and hippocampal formation
- section_title
- Molecular Identity and Transcriptomic Taxonomy
- evidence_summary
- Profiled ~1.3 million cells covering adult mouse isocortex and HPF using scRNA-seq to create comprehensive transcriptomic taxonomy.
- review_bundle_ref
- analysis_bundle:ab-e6261c8263e7
- replication_status
- independently_replicated
- review_package_ref
- analysis_bundle:ab-e6261c8263e7
- source_artifact_ref
- wiki_page:computationalreviewpv-02
- origin_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewPV/blob/df9fc7e8d455b084152c9d713558dae0013cef21/evidence/section_02_evidence_package.json
- commit_sha
- df9fc7e8d455b084152c9d713558dae0013cef21
- created_by
- persona-jerome-lecoq-gbo-neuroscience
- repository_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewPV
Raw fields (4)
- raw_fields
{ "n": 1300000, "doi": "10.1016/j.cell.2021.04.021", "claim": "The mouse isocortex and hippocampal formation contain a Pvalb subclass that divides into 3 supertypes, including a hippocampus-specific Pvalb chandelier cell cluster with unique markers Ntf3 and Sntb1.", "evidence": "Profiled ~1.3 million cells covering adult mouse isocortex and HPF using scRNA-seq to create comprehensive transcriptomic taxonomy.", "effect_size": "~1.3 million cells profiled; Pvalb divided into 3 supertypes", "text_access": "fulltext", "study_system": "mouse isocortex and hippocampal formation", "replication_status": "independently_replicated", "claim_source_sentence": "the Sst and Pvalb subclasses are divided into 11 and 3 supertypes, respectively. We also identified a HIP-specific Pvalb chandelier cell cluster #122 with unique markers Ntf3 and Sntb1.", "replication_evidence_dois": [ "10.1038/s41586-023-06812-z" ], "effect_size_source_sentence": "We profiled ~1.3 million cells covering the entire adult mouse isocortex and HPF and derived a transcriptomic cell type taxonomy." }- source_refs
[ "paper:paper-4dfe44516146" ]
- evidence_refs
[ { "ref": "paper:paper-4dfe44516146" } ]- source_policy
{ "mode": "public_source_pointer_with_short_context", "notes": [ "Local review repositories are read-only inputs.", "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose." ], "source_commit_sha": "df9fc7e8d455b084152c9d713558dae0013cef21", "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewPV" }