Details

scope
neonatal mouse barrel cortex; in vivo 2P + rabies + slice ephys
section_id
section_04
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_04_evidence_package.json
effect_size
Significant L5→L2/3 input during P1 week; silencing L5 reduces spontaneous activity and disrupts L4→L2/3 connections.
review_repo
ComputationalReviewRecurrence
section_ref
wiki_page:computationalreviewrecurrence-04-translaminar
source_kind
review_finding
source_path
evidence/section_04_evidence_package.json
study_system
neonatal mouse barrel cortex; in vivo 2P + rabies + slice ephys
section_title
4. Translaminar excitatory loops in mouse — L4→L2/3→L5→L6→L4 within the column; asymmetry of forward and backward intracortical projections
evidence_summary
Microprism in vivo 2P imaging + rabies tracing + slice electrophysiology in neonatal mouse barrel cortex.
review_bundle_ref
analysis_bundle:ab-d9c479db9be9
replication_status
replication_unknown
review_package_ref
analysis_bundle:ab-d9c479db9be9
source_artifact_ref
wiki_page:computationalreviewrecurrence-04-translaminar
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_04_evidence_package.json
commit_sha
79ce062d54a924ce05953ec90aa9d26044d2b48f
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence
Raw fields (6)
claim_text
In neonatal mouse barrel cortex, monosynaptic rabies tracing and slice electrophysiology show that L2/3 pyramidal neurons receive significant L5 input during the first postnatal week, and silencing L5 outputs disrupts L4→L2/3 connectivity — establishing an inverted developmental L5→L2/3 translaminar dependence.
raw_fields
{
  "n": 0,
  "doi": "10.1038/s41467-024-55783-w",
  "claim": "In neonatal mouse barrel cortex, monosynaptic rabies tracing and slice electrophysiology show that L2/3 pyramidal neurons receive significant L5 input during the first postnatal week, and silencing L5 outputs disrupts L4→L2/3 connectivity — establishing an inverted developmental L5→L2/3 translaminar dependence.",
  "cite_key": "VargasOrtiz2025",
  "evidence": "Microprism in vivo 2P imaging + rabies tracing + slice electrophysiology in neonatal mouse barrel cortex.",
  "effect_size": "Significant L5→L2/3 input during P1 week; silencing L5 reduces spontaneous activity and disrupts L4→L2/3 connections.",
  "text_access": "abstract_only",
  "study_system": "neonatal mouse barrel cortex; in vivo 2P + rabies + slice ephys",
  "argument_role": "supporting",
  "replication_status": "replication_unknown",
  "claim_source_sentence": "Monosynaptic rabies tracing and slice electrophysiology experiments reveal that layer 2/3 pyramidal neurons receive significant layer 5 inputs during the first postnatal week, and silencing layer 5 synaptic outputs results in a significant reduction in spontaneous activity, abnormal sensory-evoked activity and disrupted layer 4-layer 2/3 connectivity.",
  "source_provenance_status": "non_substring_match",
  "replication_evidence_dois": [],
  "effect_size_source_sentence": null
}
source_refs
[
  "paper:paper-113803f405c0"
]
source_span
Monosynaptic rabies tracing and slice electrophysiology experiments reveal that layer 2/3 pyramidal neurons receive significant layer 5 inputs during the first postnatal week, and silencing layer 5 synaptic outputs results in a significant reduction in spontaneous activity, abnormal sensory-evoked activity and disrupted layer 4-layer 2/3 connectivity.
evidence_refs
[
  {
    "ref": "paper:paper-113803f405c0"
  }
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "79ce062d54a924ce05953ec90aa9d26044d2b48f",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence"
}

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