Version history

{
  "scope": "mouse, Ctcf conditional knockout in MGE",
  "claim_text": "CTCF regulates the Lhx6/Lhx8 dichotomy in MGE, governing the choice between cortical interneuron and basal forebrain projection neuron fate",
  "raw_fields": {
    "n": 0,
    "doi": "10.1523/jneurosci.3496-17.2018",
    "claim": "CTCF regulates the Lhx6/Lhx8 dichotomy in MGE, governing the choice between cortical interneuron and basal forebrain projection neuron fate",
    "evidence": "Loss of CTCF leads to marked reduction of PV and SST CINs with increased Lhx8+ basal forebrain projection neurons; Lhx6 reexpression rescues the phenotype",
    "effect_size": "marked reduction of CINs expressing parvalbumin and somatostatin",
    "text_access": "abstract_only",
    "study_system": "mouse, Ctcf conditional knockout in MGE",
    "replication_status": "replication_unknown",
    "claim_source_sentence": "CTCF is required for the expression of the LIM homeodomain factor LHX6 involved in fate determination of cortical interneurons (CINs) that originate in the medial ganglionic eminence (MGE).",
    "replication_evidence_dois": [],
    "effect_size_source_sentence": "Conditional Ctcf ablation in the MGE of mice of either sex leads to delayed tangential migration, abnormal distribution of CIN in the neocortex, a marked reduction of CINs expressing parvalbumin and somatostatin (Sst), and an increased number of MGE-derived cells expressing Lhx8"
  },
  "section_id": "section_03_evidence_package",
  "source_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewPV/blob/df9fc7e8d455b084152c9d713558dae0013cef21/evidence/section_03_evidence_package.json",
  "effect_size": "marked reduction of CINs expressing parvalbumin and somatostatin",
  "review_repo": "ComputationalReviewPV",
  "section_ref": "wiki_page:computationalreviewpv-03",
  "source_kind": "review_finding",
  "source_path": "evidence/section_03_evidence_package.json",
  "source_refs": [
    "paper:paper-e47e8a6885ff"
  ],
  "source_span": "CTCF is required for the expression of the LIM homeodomain factor LHX6 involved in fate determination of cortical interneurons (CINs) that originate in the medial ganglionic eminence (MGE).",
  "study_system": "mouse, Ctcf conditional knockout in MGE",
  "evidence_refs": [
    {
      "ref": "paper:paper-e47e8a6885ff"
    }
  ],
  "section_title": "Developmental Origins: MGE Lineage, Specification, and Migration",
  "source_policy": {
    "mode": "public_source_pointer_with_short_context",
    "notes": [
      "Local review repositories are read-only inputs.",
      "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
    ],
    "source_commit_sha": "df9fc7e8d455b084152c9d713558dae0013cef21",
    "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewPV"
  },
  "evidence_summary": "Loss of CTCF leads to marked reduction of PV and SST CINs with increased Lhx8+ basal forebrain projection neurons; Lhx6 reexpression rescues the phenotype",
  "review_bundle_ref": "analysis_bundle:ab-e6261c8263e7",
  "replication_status": "replication_unknown",
  "review_package_ref": "analysis_bundle:ab-e6261c8263e7",
  "source_artifact_ref": "wiki_page:computationalreviewpv-03",
  "origin_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewPV/blob/df9fc7e8d455b084152c9d713558dae0013cef21/evidence/section_03_evidence_package.json",
  "commit_sha": "df9fc7e8d455b084152c9d713558dae0013cef21",
  "created_by": "persona-jerome-lecoq-gbo-neuroscience",
  "repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewPV"
}