Details

scope
Mouse multi-lab Neuropixels reproducibility study; secondary visual areas / hippocampus / thalamus
section_id
section_16
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_16_evidence_package.json
effect_size
121 experimental replicates from 10 labs
review_repo
ComputationalReviewRecurrence
section_ref
wiki_page:computationalreviewrecurrence-16-synthesis
source_kind
review_finding
source_path
evidence/section_16_evidence_package.json
source_span
This pipeline included stringent new histological and electrophysiological quality-control criteria (the ‘Recording Inclusion Guidelines for Optimizing Reproducibility’ [RIGOR]) that are applicable to datasets beyond our own.
study_system
Mouse multi-lab Neuropixels reproducibility study; secondary visual areas / hippocampus / thalamus
section_title
16. Synthesis — which computational claims the mouse-cortex E→E empirical record actually supports, where the bottleneck observations are, and what an inhibition-free, single-species, basic-research analytic framing misses
evidence_summary
Empirical assessment that even with standardized hardware and task, electrode targeting and limited statistical power drive cross-lab variability; explicit QC criteria offered as mitigation.
review_bundle_ref
analysis_bundle:ab-d9c479db9be9
replication_status
single-study
review_package_ref
analysis_bundle:ab-d9c479db9be9
source_artifact_ref
wiki_page:computationalreviewrecurrence-16-synthesis
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_16_evidence_package.json
commit_sha
79ce062d54a924ce05953ec90aa9d26044d2b48f
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence
Raw fields (5)
claim_text
A 10-laboratory International Brain Laboratory replication study repeatedly targeted Neuropixels probes to the same brain locations (secondary visual areas, hippocampus, and thalamus) in mice performing a standardized decision-making task and developed RIGOR histological and electrophysiological quality-control criteria to enhance reproducibility.
raw_fields
{
  "n": 121,
  "doi": "10.7554/elife.100840",
  "claim": "A 10-laboratory International Brain Laboratory replication study repeatedly targeted Neuropixels probes to the same brain locations (secondary visual areas, hippocampus, and thalamus) in mice performing a standardized decision-making task and developed RIGOR histological and electrophysiological quality-control criteria to enhance reproducibility.",
  "cite_key": "InternationalBrainLaboratory2025b",
  "evidence": "Empirical assessment that even with standardized hardware and task, electrode targeting and limited statistical power drive cross-lab variability; explicit QC criteria offered as mitigation.",
  "effect_size": "121 experimental replicates from 10 labs",
  "text_access": "fulltext",
  "study_system": "Mouse multi-lab Neuropixels reproducibility study; secondary visual areas / hippocampus / thalamus",
  "argument_role": "supporting",
  "replication_status": "single-study",
  "claim_source_sentence": "This pipeline included stringent new histological and electrophysiological quality-control criteria (the ‘Recording Inclusion Guidelines for Optimizing Reproducibility’ [RIGOR]) that are applicable to datasets beyond our own.",
  "source_provenance_status": "ok",
  "replication_evidence_dois": [],
  "effect_size_source_sentence": "Experimenters in 10 laboratories repeatedly targeted Neuropixels probes to the same location (spanning secondary visual areas, hippocampus, and thalamus) in mice making decisions; this generated a total of 121 experimental replicates, a unique dataset for evaluating reproducibility of electrophysiology experiments."
}
source_refs
[
  "paper:805df180-8279-474b-b134-8b931e75d832"
]
evidence_refs
[
  {
    "ref": "paper:805df180-8279-474b-b134-8b931e75d832"
  }
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "79ce062d54a924ce05953ec90aa9d26044d2b48f",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence"
}

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