Version history

{
  "scope": "mice lgn ()",
  "claim_text": "We report that genes that are normally enriched in dLGN, but not LP during development are preferentially downregulated in dLGN following monocular enucleation.",
  "raw_fields": {
    "n": 0,
    "doi": "10.1002/cne.25304",
    "claim": "We report that genes that are normally enriched in dLGN, but not LP during development are preferentially downregulated in dLGN following monocular enucleation.",
    "cite_key": "Giasafaki2022",
    "evidence": "PubMed-indexed paper 'Cross-hierarchical plasticity of corticofugal projections to dLGN after neonatal monocular enucleation.' (PMID 35078267); content extracted from fulltext.",
    "effect_size": "se (Sigma‐Aldrich) and cut to 200 μm coronal slices using a vibrat",
    "text_access": "fulltext",
    "study_system": "mice lgn ()",
    "source_cluster_id": "cluster_05",
    "replication_status": "replication_unknown",
    "claim_source_sentence": "We report that genes that are normally enriched in dLGN, but not LP during development are preferentially downregulated in dLGN following monocular enucleation.",
    "replication_evidence_dois": [],
    "effect_size_source_sentence": "Brains were dissected in RNase‐free conditions, embedded in low‐melting point agarose (Sigma‐Aldrich) and cut to 200 μm coronal slices using a vibrating microtome (Leica VT1000S)."
  },
  "section_id": "section_06",
  "source_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewLoops/blob/0632aae8abc141909207fe91f6349b9e36489c3b/evidence/section_06_evidence_package.json",
  "effect_size": "se (Sigma‐Aldrich) and cut to 200 μm coronal slices using a vibrat",
  "review_repo": "ComputationalReviewLoops",
  "section_ref": "wiki_page:computationalreviewloops-06",
  "source_kind": "review_finding",
  "source_path": "evidence/section_06_evidence_package.json",
  "source_refs": [
    "paper:paper-f353a07741e4"
  ],
  "source_span": "We report that genes that are normally enriched in dLGN, but not LP during development are preferentially downregulated in dLGN following monocular enucleation.",
  "study_system": "mice lgn ()",
  "evidence_refs": [
    {
      "ref": "paper:paper-f353a07741e4"
    }
  ],
  "section_title": "Thalamic Feedback: Closing the Loop",
  "source_policy": {
    "mode": "public_source_pointer_with_short_context",
    "notes": [
      "Local review repositories are read-only inputs.",
      "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
    ],
    "source_commit_sha": "0632aae8abc141909207fe91f6349b9e36489c3b",
    "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewLoops"
  },
  "evidence_summary": "PubMed-indexed paper 'Cross-hierarchical plasticity of corticofugal projections to dLGN after neonatal monocular enucleation.' (PMID 35078267); content extracted from fulltext.",
  "review_bundle_ref": "analysis_bundle:ab-d49e54403ef9",
  "replication_status": "replication_unknown",
  "review_package_ref": "analysis_bundle:ab-d49e54403ef9",
  "source_artifact_ref": "wiki_page:computationalreviewloops-06",
  "origin_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewLoops/blob/0632aae8abc141909207fe91f6349b9e36489c3b/evidence/section_06_evidence_package.json",
  "commit_sha": "0632aae8abc141909207fe91f6349b9e36489c3b",
  "created_by": "persona-jerome-lecoq-gbo-neuroscience",
  "repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewLoops"
}