Version history

{
  "scope": "Mouse (Cre driver lines, C57BL/6J background); cortex + thalamus",
  "claim_text": "Cell-class-specific cortico-cortical connections in mouse cortex are organized in a shallow hierarchy in which feedforward vs feedback assignment can be inferred from axon termination patterns across ~1,000 new Allen tracer experiments.",
  "raw_fields": {
    "n": 1000,
    "doi": "10.1038/s41586-019-1716-z",
    "claim": "Cell-class-specific cortico-cortical connections in mouse cortex are organized in a shallow hierarchy in which feedforward vs feedback assignment can be inferred from axon termination patterns across ~1,000 new Allen tracer experiments.",
    "cite_key": "Harris2019",
    "evidence": "Allen Mouse Brain Connectivity Atlas expansion with ~1,000 Cre-driver-line tracer injections; FF/FB labels assigned from axon-termination patterns and used to derive hierarchy scores for individual cortical areas and network modules.",
    "effect_size": "~1,000 new tracer experiments; hierarchy described as 'shallow'",
    "text_access": "abstract_only",
    "study_system": "Mouse (Cre driver lines, C57BL/6J background); cortex + thalamus",
    "argument_role": "supporting",
    "replication_status": "replicated",
    "claim_source_sentence": "Our results show that cell-class-specific connections are organized in a shallow hierarchy within the mouse corticothalamic network.",
    "source_provenance_status": "non_substring_match",
    "replication_evidence_dois": [
      "10.1016/j.cell.2020.04.007",
      "10.7554/eLife.59551"
    ],
    "effect_size_source_sentence": "Here we describe a major expansion of the Allen Mouse Brain Connectivity Atlas resource, involving around a thousand new tracer experiments in the cortex and its main satellite structure, the thalamus."
  },
  "section_id": "section_08",
  "source_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_08_evidence_package.json",
  "effect_size": "~1,000 new tracer experiments; hierarchy described as 'shallow'",
  "review_repo": "ComputationalReviewRecurrence",
  "section_ref": "wiki_page:computationalreviewrecurrence-08-cross-areal",
  "source_kind": "review_finding",
  "source_path": "evidence/section_08_evidence_package.json",
  "source_refs": [
    "paper:paper-259a50694faa"
  ],
  "source_span": "Our results show that cell-class-specific connections are organized in a shallow hierarchy within the mouse corticothalamic network.",
  "study_system": "Mouse (Cre driver lines, C57BL/6J background); cortex + thalamus",
  "evidence_refs": [
    {
      "ref": "paper:paper-259a50694faa"
    }
  ],
  "section_title": "8. Cross-areal mouse cortico-cortical excitatory connectivity — hierarchical feedforward and feedback as recurrent loops at the network level; Allen Mouse Connectivity Atlas anchored views",
  "source_policy": {
    "mode": "public_source_pointer_with_short_context",
    "notes": [
      "Local review repositories are read-only inputs.",
      "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
    ],
    "source_commit_sha": "79ce062d54a924ce05953ec90aa9d26044d2b48f",
    "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence"
  },
  "evidence_summary": "Allen Mouse Brain Connectivity Atlas expansion with ~1,000 Cre-driver-line tracer injections; FF/FB labels assigned from axon-termination patterns and used to derive hierarchy scores for individual cortical areas and network modules.",
  "review_bundle_ref": "analysis_bundle:ab-d9c479db9be9",
  "replication_status": "replicated",
  "review_package_ref": "analysis_bundle:ab-d9c479db9be9",
  "source_artifact_ref": "wiki_page:computationalreviewrecurrence-08-cross-areal",
  "origin_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_08_evidence_package.json",
  "commit_sha": "79ce062d54a924ce05953ec90aa9d26044d2b48f",
  "created_by": "persona-jerome-lecoq-gbo-neuroscience",
  "repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence"
}