Details

scope
mouse embryonic ganglionic eminence
section_id
section_03
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_03_evidence_package.json
review_repo
ComputationalReviewVIP
section_ref
wiki_page:computationalreviewvip-03-development
source_kind
review_finding
source_path
evidence/section_03_evidence_package.json
study_system
mouse embryonic ganglionic eminence
section_title
Developmental Origins and Postnatal Maturation
evidence_summary
Nat Neurosci 2024. Method: in vivo CRISPR, lineage tracing, ChIP-seq in mouse embryonic GE.
review_bundle_ref
analysis_bundle:ab-2ce40c33e827
replication_status
single_study
review_package_ref
analysis_bundle:ab-2ce40c33e827
source_artifact_ref
wiki_page:computationalreviewvip-03-development
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_03_evidence_package.json
commit_sha
95e761177f7d2ec565983d3307c14ec238f9677c
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewVIP
Raw fields (6)
claim_text
In the mouse ganglionic eminence, MEIS2 binds projection-neuron-specific enhancers and drives GABAergic projection-neuron (e.g. striatal SPN) fate; MEIS2 requires DLX5 to occupy correct sites. In interneuron precursors, LHX6 represses MEIS2–DLX5 activation of projection-neuron enhancers, redirecting fate toward MGE-cortical interneuron lineages — establishing a 'differential binding' model for projection-neuron vs interneuron fate choice.
raw_fields
{
  "n": null,
  "doi": "10.1038/s41593-024-01611-9",
  "claim": "In the mouse ganglionic eminence, MEIS2 binds projection-neuron-specific enhancers and drives GABAergic projection-neuron (e.g. striatal SPN) fate; MEIS2 requires DLX5 to occupy correct sites. In interneuron precursors, LHX6 represses MEIS2–DLX5 activation of projection-neuron enhancers, redirecting fate toward MGE-cortical interneuron lineages — establishing a 'differential binding' model for projection-neuron vs interneuron fate choice.",
  "title": null,
  "cite_key": "Dvoretskova2024",
  "evidence": "Nat Neurosci 2024. Method: in vivo CRISPR, lineage tracing, ChIP-seq in mouse embryonic GE.",
  "effect_size": null,
  "figure_data": null,
  "text_access": "abstract_only",
  "key_entities": [
    "MEIS2",
    "DLX5",
    "LHX6",
    "projection neuron",
    "interneuron",
    "enhancer",
    "ChIP-seq",
    "CRISPR",
    "ganglionic eminence",
    "fate specification"
  ],
  "study_system": "mouse embryonic ganglionic eminence",
  "_source_cluster": "cluster_02_development_lineage",
  "replication_status": "single_study",
  "_source_cluster_index": 142,
  "claim_source_sentence": "We use a combination of in vivo CRISPR perturbation, lineage tracing and ChIP-sequencing analyses and show that the transcription factor MEIS2 favors the development of projection neurons by binding enhancer regions in projection-neuron-specific genes during mouse embryonic development. MEIS2 requires the presence of the homeodomain transcription factor DLX5 to direct its functional activity toward the appropriate binding sites. In interneuron precursors, the transcription factor LHX6 represses the MEIS2-DLX5-dependent activation of projection-neuron-specific enhancers.",
  "replication_evidence_dois": [],
  "effect_size_source_sentence": null
}
source_refs
[
  "paper:paper-96ec1199d9ce"
]
source_span
We use a combination of in vivo CRISPR perturbation, lineage tracing and ChIP-sequencing analyses and show that the transcription factor MEIS2 favors the development of projection neurons by binding enhancer regions in projection-neuron-specific genes during mouse embryonic development. MEIS2 requires the presence of the homeodomain transcription factor DLX5 to direct its functional activity toward the appropriate b...
evidence_refs
[
  {
    "ref": "paper:paper-96ec1199d9ce"
  }
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "95e761177f7d2ec565983d3307c14ec238f9677c",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP"
}

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