Details

scope
mouse, human, and macaque brain slices
section_id
section_05_evidence_package
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewPV/blob/df9fc7e8d455b084152c9d713558dae0013cef21/evidence/section_05_evidence_package.json
effect_size
systematic multimodal data from human and macaque brain slices
review_repo
ComputationalReviewPV
section_ref
wiki_page:computationalreviewpv-05
source_kind
review_finding
source_path
evidence/section_05_evidence_package.json
source_span
We recognized the importance of extracting the nucleus for transcriptomic success and maximizing membrane integrity during nucleus extraction for morphology success.
study_system
mouse, human, and macaque brain slices
section_title
Intrinsic Electrophysiology: The Fast-Spiking Phenotype and Its Variants
evidence_summary
Protocol generalizable to different species and brain regions, demonstrated on human and macaque brain slices with publicly available tools and datasets.
review_bundle_ref
analysis_bundle:ab-e6261c8263e7
replication_status
independently_replicated
review_package_ref
analysis_bundle:ab-e6261c8263e7
source_artifact_ref
wiki_page:computationalreviewpv-05
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewPV/blob/df9fc7e8d455b084152c9d713558dae0013cef21/evidence/section_05_evidence_package.json
commit_sha
df9fc7e8d455b084152c9d713558dae0013cef21
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewPV
Raw fields (5)
claim_text
Optimized Patch-seq protocols with automated acquisition and online quality control enable systematic multimodal characterization of neurons across species, with nucleus extraction being critical for transcriptomic success and membrane integrity for morphology success.
raw_fields
{
  "n": 0,
  "doi": "10.7554/elife.65482",
  "claim": "Optimized Patch-seq protocols with automated acquisition and online quality control enable systematic multimodal characterization of neurons across species, with nucleus extraction being critical for transcriptomic success and membrane integrity for morphology success.",
  "evidence": "Protocol generalizable to different species and brain regions, demonstrated on human and macaque brain slices with publicly available tools and datasets.",
  "effect_size": "systematic multimodal data from human and macaque brain slices",
  "text_access": "fulltext",
  "study_system": "mouse, human, and macaque brain slices",
  "replication_status": "independently_replicated",
  "claim_source_sentence": "We recognized the importance of extracting the nucleus for transcriptomic success and maximizing membrane integrity during nucleus extraction for morphology success.",
  "replication_evidence_dois": [
    "10.1126/science.adf6484"
  ],
  "effect_size_source_sentence": "The protocol is generalizable to different species and brain regions, as demonstrated by capturing multimodal data from human and macaque brain slices."
}
source_refs
[
  "paper:paper-pm-34387544"
]
evidence_refs
[
  {
    "ref": "paper:paper-pm-34387544"
  }
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "df9fc7e8d455b084152c9d713558dae0013cef21",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewPV"
}

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