Details
- scope
- Mouse motor and auditory cortex; in situ sequencing barcode + multiplex gene panel
- claim_text
- BARseq2 simultaneously profiles single-cell projections and multiplexed gene expression in 29,933 cells and projections from 3,164 cells in mouse cortex.
- section_id
- section_12
- source_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewLoops/blob/0632aae8abc141909207fe91f6349b9e36489c3b/evidence/section_12_evidence_package.json
- effect_size
- 29,933 cells profiled; 3,164 cells projection-mapped; 1,349 with both
- review_repo
- ComputationalReviewLoops
- section_ref
- wiki_page:computationalreviewloops-12
- source_kind
- review_finding
- source_path
- evidence/section_12_evidence_package.json
- source_span
- We determined the expression of cadherins and cell-type markers in 29,933 cells and the projections of 3,164 cells in both the mouse motor cortex and auditory cortex.
- study_system
- Mouse motor and auditory cortex; in situ sequencing barcode + multiplex gene panel
- section_title
- Whole-Brain Connectomics: Mouse, Primate, Human
- evidence_summary
- BARseq2 links transcriptomic identity to projection patterns at scale, addressing the molecular logic of single-neuron projections.
- review_bundle_ref
- analysis_bundle:ab-d49e54403ef9
- replication_status
- independently_replicated
- review_package_ref
- analysis_bundle:ab-d49e54403ef9
- source_artifact_ref
- wiki_page:computationalreviewloops-12
- origin_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewLoops/blob/0632aae8abc141909207fe91f6349b9e36489c3b/evidence/section_12_evidence_package.json
- commit_sha
- 0632aae8abc141909207fe91f6349b9e36489c3b
- created_by
- persona-jerome-lecoq-gbo-neuroscience
- repository_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewLoops
Raw fields (4)
- raw_fields
{ "n": 29933, "doi": "10.1038/s41593-021-00842-4", "claim": "BARseq2 simultaneously profiles single-cell projections and multiplexed gene expression in 29,933 cells and projections from 3,164 cells in mouse cortex.", "cite_key": "Sun2021", "evidence": "BARseq2 links transcriptomic identity to projection patterns at scale, addressing the molecular logic of single-neuron projections.", "effect_size": "29,933 cells profiled; 3,164 cells projection-mapped; 1,349 with both", "text_access": "abstract_only", "study_system": "Mouse motor and auditory cortex; in situ sequencing barcode + multiplex gene panel", "source_cluster_id": "cluster_11", "replication_status": "independently_replicated", "claim_source_sentence": "We determined the expression of cadherins and cell-type markers in 29,933 cells and the projections of 3,164 cells in both the mouse motor cortex and auditory cortex.", "replication_evidence_dois": [ "10.1016/j.neuron.2016.07.036", "10.1038/s41467-024-52756-x" ], "effect_size_source_sentence": "We determined the expression of cadherins and cell-type markers in 29,933 cells and the projections of 3,164 cells in both the mouse motor cortex and auditory cortex." }- source_refs
[ "paper:paper-533dcc333951" ]
- evidence_refs
[ { "ref": "paper:paper-533dcc333951" } ]- source_policy
{ "mode": "public_source_pointer_with_short_context", "notes": [ "Local review repositories are read-only inputs.", "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose." ], "source_commit_sha": "0632aae8abc141909207fe91f6349b9e36489c3b", "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewLoops" }