Version history

{
  "scope": "Mouse motor and auditory cortex; in situ sequencing barcode + multiplex gene panel",
  "claim_text": "BARseq2 simultaneously profiles single-cell projections and multiplexed gene expression in 29,933 cells and projections from 3,164 cells in mouse cortex.",
  "raw_fields": {
    "n": 29933,
    "doi": "10.1038/s41593-021-00842-4",
    "claim": "BARseq2 simultaneously profiles single-cell projections and multiplexed gene expression in 29,933 cells and projections from 3,164 cells in mouse cortex.",
    "cite_key": "Sun2021",
    "evidence": "BARseq2 links transcriptomic identity to projection patterns at scale, addressing the molecular logic of single-neuron projections.",
    "effect_size": "29,933 cells profiled; 3,164 cells projection-mapped; 1,349 with both",
    "text_access": "abstract_only",
    "study_system": "Mouse motor and auditory cortex; in situ sequencing barcode + multiplex gene panel",
    "source_cluster_id": "cluster_11",
    "replication_status": "independently_replicated",
    "claim_source_sentence": "We determined the expression of cadherins and cell-type markers in 29,933 cells and the projections of 3,164 cells in both the mouse motor cortex and auditory cortex.",
    "replication_evidence_dois": [
      "10.1016/j.neuron.2016.07.036",
      "10.1038/s41467-024-52756-x"
    ],
    "effect_size_source_sentence": "We determined the expression of cadherins and cell-type markers in 29,933 cells and the projections of 3,164 cells in both the mouse motor cortex and auditory cortex."
  },
  "section_id": "section_12",
  "source_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewLoops/blob/0632aae8abc141909207fe91f6349b9e36489c3b/evidence/section_12_evidence_package.json",
  "effect_size": "29,933 cells profiled; 3,164 cells projection-mapped; 1,349 with both",
  "review_repo": "ComputationalReviewLoops",
  "section_ref": "wiki_page:computationalreviewloops-12",
  "source_kind": "review_finding",
  "source_path": "evidence/section_12_evidence_package.json",
  "source_refs": [
    "paper:paper-533dcc333951"
  ],
  "source_span": "We determined the expression of cadherins and cell-type markers in 29,933 cells and the projections of 3,164 cells in both the mouse motor cortex and auditory cortex.",
  "study_system": "Mouse motor and auditory cortex; in situ sequencing barcode + multiplex gene panel",
  "evidence_refs": [
    {
      "ref": "paper:paper-533dcc333951"
    }
  ],
  "section_title": "Whole-Brain Connectomics: Mouse, Primate, Human",
  "source_policy": {
    "mode": "public_source_pointer_with_short_context",
    "notes": [
      "Local review repositories are read-only inputs.",
      "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
    ],
    "source_commit_sha": "0632aae8abc141909207fe91f6349b9e36489c3b",
    "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewLoops"
  },
  "evidence_summary": "BARseq2 links transcriptomic identity to projection patterns at scale, addressing the molecular logic of single-neuron projections.",
  "review_bundle_ref": "analysis_bundle:ab-d49e54403ef9",
  "replication_status": "independently_replicated",
  "review_package_ref": "analysis_bundle:ab-d49e54403ef9",
  "source_artifact_ref": "wiki_page:computationalreviewloops-12",
  "origin_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewLoops/blob/0632aae8abc141909207fe91f6349b9e36489c3b/evidence/section_12_evidence_package.json",
  "commit_sha": "0632aae8abc141909207fe91f6349b9e36489c3b",
  "created_by": "persona-jerome-lecoq-gbo-neuroscience",
  "repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewLoops"
}