Version history

{
  "scope": "cross-species M1 multi-modal atlas (human, marmoset, mouse)",
  "claim_text": "Cross-species comparative motor cortex taxonomy (BICCN) shows that Vip GABAergic subtypes are markedly more diversified between humans/marmosets and mice than between primates, indicating species-specific expansion of the VIP transcriptomic landscape that frames cross-species comparisons of VIP intrinsic electrophysiology.",
  "raw_fields": {
    "n": null,
    "doi": "10.1038/s41586-021-03465-8",
    "claim": "Cross-species comparative motor cortex taxonomy (BICCN) shows that Vip GABAergic subtypes are markedly more diversified between humans/marmosets and mice than between primates, indicating species-specific expansion of the VIP transcriptomic landscape that frames cross-species comparisons of VIP intrinsic electrophysiology.",
    "title": null,
    "cite_key": "Bakken2021a",
    "evidence": "multi-omic atlas (snRNA-seq, snATAC-seq, snmC-seq2) of M1 across human, marmoset, mouse; multi-modal alignment of consensus clusters",
    "effect_size": "qualitative — more Vip consensus types preserved between human/marmoset than human/mouse",
    "text_access": "fulltext",
    "study_system": "cross-species M1 multi-modal atlas (human, marmoset, mouse)",
    "_source_cluster": "cluster_04_intrinsic_electrophysiology",
    "replication_status": "replication_unknown",
    "_source_cluster_index": 13,
    "claim_source_sentence": "More consensus clusters could be resolved by pairwise alignment between humans and marmosets than between either of these primates and mice, particularly for Vip subtypes",
    "replication_evidence_dois": [
      "10.1038/s41586-020-2907-3",
      "10.1126/science.adf6484"
    ],
    "effect_size_source_sentence": "More consensus clusters could be resolved by pairwise alignment between humans and marmosets than between either of these primates and mice, particularly for Vip subtypes"
  },
  "section_id": "section_05",
  "source_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_05_evidence_package.json",
  "effect_size": "qualitative — more Vip consensus types preserved between human/marmoset than human/mouse",
  "review_repo": "ComputationalReviewVIP",
  "section_ref": "wiki_page:computationalreviewvip-05-electrophysiology",
  "source_kind": "review_finding",
  "source_path": "evidence/section_05_evidence_package.json",
  "source_refs": [
    "paper:paper-pm-34616062"
  ],
  "source_span": "More consensus clusters could be resolved by pairwise alignment between humans and marmosets than between either of these primates and mice, particularly for Vip subtypes",
  "study_system": "cross-species M1 multi-modal atlas (human, marmoset, mouse)",
  "evidence_refs": [
    {
      "ref": "paper:paper-pm-34616062"
    }
  ],
  "section_title": "Intrinsic Electrophysiology",
  "source_policy": {
    "mode": "public_source_pointer_with_short_context",
    "notes": [
      "Local review repositories are read-only inputs.",
      "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
    ],
    "source_commit_sha": "95e761177f7d2ec565983d3307c14ec238f9677c",
    "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP"
  },
  "evidence_summary": "multi-omic atlas (snRNA-seq, snATAC-seq, snmC-seq2) of M1 across human, marmoset, mouse; multi-modal alignment of consensus clusters",
  "review_bundle_ref": "analysis_bundle:ab-2ce40c33e827",
  "replication_status": "replication_unknown",
  "review_package_ref": "analysis_bundle:ab-2ce40c33e827",
  "source_artifact_ref": "wiki_page:computationalreviewvip-05-electrophysiology",
  "origin_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_05_evidence_package.json",
  "commit_sha": "95e761177f7d2ec565983d3307c14ec238f9677c",
  "created_by": "persona-jerome-lecoq-gbo-neuroscience",
  "repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP"
}