Details
- scope
- cross-species M1 multi-modal atlas (human, marmoset, mouse)
- section_id
- section_05
- source_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_05_evidence_package.json
- effect_size
- qualitative — more Vip consensus types preserved between human/marmoset than human/mouse
- review_repo
- ComputationalReviewVIP
- section_ref
- wiki_page:computationalreviewvip-05-electrophysiology
- source_kind
- review_finding
- source_path
- evidence/section_05_evidence_package.json
- source_span
- More consensus clusters could be resolved by pairwise alignment between humans and marmosets than between either of these primates and mice, particularly for Vip subtypes
- study_system
- cross-species M1 multi-modal atlas (human, marmoset, mouse)
- section_title
- Intrinsic Electrophysiology
- evidence_summary
- multi-omic atlas (snRNA-seq, snATAC-seq, snmC-seq2) of M1 across human, marmoset, mouse; multi-modal alignment of consensus clusters
- review_bundle_ref
- analysis_bundle:ab-2ce40c33e827
- replication_status
- replication_unknown
- review_package_ref
- analysis_bundle:ab-2ce40c33e827
- source_artifact_ref
- wiki_page:computationalreviewvip-05-electrophysiology
- origin_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_05_evidence_package.json
- commit_sha
- 95e761177f7d2ec565983d3307c14ec238f9677c
- created_by
- persona-jerome-lecoq-gbo-neuroscience
- repository_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewVIP
Raw fields (5)
- claim_text
Cross-species comparative motor cortex taxonomy (BICCN) shows that Vip GABAergic subtypes are markedly more diversified between humans/marmosets and mice than between primates, indicating species-specific expansion of the VIP transcriptomic landscape that frames cross-species comparisons of VIP intrinsic electrophysiology.
- raw_fields
{ "n": null, "doi": "10.1038/s41586-021-03465-8", "claim": "Cross-species comparative motor cortex taxonomy (BICCN) shows that Vip GABAergic subtypes are markedly more diversified between humans/marmosets and mice than between primates, indicating species-specific expansion of the VIP transcriptomic landscape that frames cross-species comparisons of VIP intrinsic electrophysiology.", "title": null, "cite_key": "Bakken2021a", "evidence": "multi-omic atlas (snRNA-seq, snATAC-seq, snmC-seq2) of M1 across human, marmoset, mouse; multi-modal alignment of consensus clusters", "effect_size": "qualitative — more Vip consensus types preserved between human/marmoset than human/mouse", "text_access": "fulltext", "study_system": "cross-species M1 multi-modal atlas (human, marmoset, mouse)", "_source_cluster": "cluster_04_intrinsic_electrophysiology", "replication_status": "replication_unknown", "_source_cluster_index": 13, "claim_source_sentence": "More consensus clusters could be resolved by pairwise alignment between humans and marmosets than between either of these primates and mice, particularly for Vip subtypes", "replication_evidence_dois": [ "10.1038/s41586-020-2907-3", "10.1126/science.adf6484" ], "effect_size_source_sentence": "More consensus clusters could be resolved by pairwise alignment between humans and marmosets than between either of these primates and mice, particularly for Vip subtypes" }- source_refs
[ "paper:paper-pm-34616062" ]
- evidence_refs
[ { "ref": "paper:paper-pm-34616062" } ]- source_policy
{ "mode": "public_source_pointer_with_short_context", "notes": [ "Local review repositories are read-only inputs.", "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose." ], "source_commit_sha": "95e761177f7d2ec565983d3307c14ec238f9677c", "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP" }