Details

scope
mouse motor cortex, thalamus, subiculum, hypothalamus projection neurons
section_id
section_07
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_07_evidence_package.json
effect_size
quantitative — >1,000 reconstructed neurons across 4 brain regions
review_repo
ComputationalReviewRecurrence
section_ref
wiki_page:computationalreviewrecurrence-07-celltype-motifs
source_kind
review_finding
source_path
evidence/section_07_evidence_package.json
study_system
mouse motor cortex, thalamus, subiculum, hypothalamus projection neurons
section_title
7. Cell-type-specific E→E motifs in mouse — IT vs PT vs CT pyramidal projection classes; L5 thick-tufted recurrence; Patch-seq and Allen mouse-cortex taxonomy intersections; transcriptomic-type-specific connectivity
evidence_summary
High-throughput serial-block-face two-photon imaging plus manual single-neuron tracing of mouse cortical and subcortical projection neurons.
review_bundle_ref
analysis_bundle:ab-d9c479db9be9
replication_status
independently_replicated
review_package_ref
analysis_bundle:ab-d9c479db9be9
source_artifact_ref
wiki_page:computationalreviewrecurrence-07-celltype-motifs
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_07_evidence_package.json
commit_sha
79ce062d54a924ce05953ec90aa9d26044d2b48f
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence
Raw fields (6)
claim_text
Brain-wide light-sheet imaging and manual reconstruction of 1,000+ individual projection neurons in mouse motor cortex, thalamus, subiculum and hypothalamus identifies previously undescribed projection-neuron subtypes and reveals organizational principles of long-range corticocortical and cortico-subcortical wiring (e.g. discrete IT, PT, CT subtype axonal patterns within mouse M1 L5).
raw_fields
{
  "n": 1000,
  "doi": "10.1016/j.cell.2019.07.042",
  "claim": "Brain-wide light-sheet imaging and manual reconstruction of 1,000+ individual projection neurons in mouse motor cortex, thalamus, subiculum and hypothalamus identifies previously undescribed projection-neuron subtypes and reveals organizational principles of long-range corticocortical and cortico-subcortical wiring (e.g. discrete IT, PT, CT subtype axonal patterns within mouse M1 L5).",
  "cite_key": "Winnubst2019",
  "evidence": "High-throughput serial-block-face two-photon imaging plus manual single-neuron tracing of mouse cortical and subcortical projection neurons.",
  "effect_size": "quantitative — >1,000 reconstructed neurons across 4 brain regions",
  "text_access": "fulltext",
  "study_system": "mouse motor cortex, thalamus, subiculum, hypothalamus projection neurons",
  "argument_role": "supporting",
  "replication_status": "independently_replicated",
  "claim_source_sentence": "we reconstructed more than 1,000 projection neurons in the motor cortex, thalamus, subiculum, and hypothalamus. Together, the reconstructed neurons comprise more than 85 meters of axonal length and are available in a searchable online database. Axonal shapes revealed previously unknown subtypes of projection neurons and suggest organizational principles of long-range connectivity",
  "source_provenance_status": "ok",
  "replication_evidence_dois": [
    "10.1038/s41586-021-04020-1"
  ],
  "effect_size_source_sentence": "more than 1,000 projection neurons in the motor cortex, thalamus, subiculum, and hypothalamus"
}
source_refs
[
  "paper:041efce6-fc13-4416-8aca-e196f82f3d70"
]
source_span
we reconstructed more than 1,000 projection neurons in the motor cortex, thalamus, subiculum, and hypothalamus. Together, the reconstructed neurons comprise more than 85 meters of axonal length and are available in a searchable online database. Axonal shapes revealed previously unknown subtypes of projection neurons and suggest organizational principles of long-range connectivity
evidence_refs
[
  {
    "ref": "paper:041efce6-fc13-4416-8aca-e196f82f3d70"
  }
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "79ce062d54a924ce05953ec90aa9d26044d2b48f",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence"
}

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