Version history

1 version on record. Newest first; the live version sits at the top with a live indicator.

  1. Live defa6e961ea9
    5/17/2026, 4:35:28 PM
    Content snapshot
    {
      "scope": "mouse; V1, visual cortex; optogenetics; The Journal of physiology",
      "claim_text": "Optogenetic tools have been used to investigate neural circuits in mouse primary visual cortex (V1), where channelrhodopsin-mediated activation (photostimulation) of inhibitory interneuron subtypes e…",
      "raw_fields": {
        "n": null,
        "doi": "10.1113/jp287265",
        "claim": "Optogenetic tools have been used to investigate neural circuits in mouse primary visual cortex (V1), where channelrhodopsin-mediated activation (photostimulation) of inhibitory interneuron subtypes e…",
        "cite_key": "Shapiro2025",
        "evidence": "Optogenetic tools have been used to investigate neural circuits in mouse primary visual cortex (V1), where channelrhodopsin-mediated activation (photostimulation) of inhibitory interneuron subtypes expressing parvalbumin (Pvalb+), somatostatin (SOM+) or vasoactive intestinal peptide (VIP+) can alter the responses of excitatory pyramidal neurons. Some studies have mentioned rebound spiking after this photostimulation, but no systematic analysis of these post-inhibitory rebound effects has yet bee...",
        "effect_size": "Pyr cells (black triangles) use excitatory glutamatergic chemical synapses (Excite) to activate interneurons with feedforward (FF) or feedback (FB) connections., spike density function (SDF) and raster plot showing a Pvalb+ interneuron's response to a drifting 100% contrast sine wave grating without (black line) or with optogenetic activation (red line).",
        "text_access": "fulltext",
        "study_system": "mouse; V1, visual cortex; optogenetics; The Journal of physiology",
        "argument_role": "supporting",
        "replication_status": "single_study",
        "claim_source_sentence": "Optogenetic tools have been used to investigate neural circuits in mouse primary visual cortex (V1), where channelrhodopsin-mediated activation (photostimulation) of inhibitory interneuron subtypes expressing parvalbumin (Pvalb+), somatostatin (SOM+) or vasoactive intestinal peptide (VIP+) can alter the responses of excitatory pyramidal neurons.",
        "source_provenance_status": "ok",
        "replication_evidence_dois": [],
        "claim_rewritten_from_source": true,
        "effect_size_source_sentence": "Pyr cells (black triangles) use excitatory glutamatergic chemical synapses (Excite) to activate interneurons with feedforward (FF) or feedback (FB) connections., spike density function (SDF) and raster plot showing a Pvalb+ interneuron's response to a drifting 100% contrast sine wave grating without (black line) or with optogenetic activation (red line)."
      },
      "section_id": "section_09",
      "source_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_09_evidence_package.json",
      "effect_size": "Pyr cells (black triangles) use excitatory glutamatergic chemical synapses (Excite) to activate interneurons with feedforward (FF) or feedback (FB) connections., spike density function (SDF) and raster plot showing a Pvalb+ interneuron's response to a drifting 100% contrast sine wave grating without (black line) or with optogenetic activation (red line).",
      "review_repo": "ComputationalReviewRecurrence",
      "section_ref": "wiki_page:computationalreviewrecurrence-09-amplification-isn",
      "source_kind": "review_finding",
      "source_path": "evidence/section_09_evidence_package.json",
      "source_refs": [
        "paper:paper-410b852f3cc3"
      ],
      "source_span": "Optogenetic tools have been used to investigate neural circuits in mouse primary visual cortex (V1), where channelrhodopsin-mediated activation (photostimulation) of inhibitory interneuron subtypes expressing parvalbumin (Pvalb+), somatostatin (SOM+) or vasoactive intestinal peptide (VIP+) can alter the responses of excitatory pyramidal neurons.",
      "study_system": "mouse; V1, visual cortex; optogenetics; The Journal of physiology",
      "evidence_refs": [
        {
          "ref": "paper:paper-410b852f3cc3"
        }
      ],
      "section_title": "9. Physiological signature I — recurrent amplification of weak inputs in mouse cortex; balanced-amplification regimes; ISN operation",
      "source_policy": {
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        "notes": [
          "Local review repositories are read-only inputs.",
          "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
        ],
        "source_commit_sha": "79ce062d54a924ce05953ec90aa9d26044d2b48f",
        "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence"
      },
      "evidence_summary": "Optogenetic tools have been used to investigate neural circuits in mouse primary visual cortex (V1), where channelrhodopsin-mediated activation (photostimulation) of inhibitory interneuron subtypes expressing parvalbumin (Pvalb+), somatostatin (SOM+) or vasoactive intestinal peptide (VIP+) can alter the responses of excitatory pyramidal neurons. Some studies have mentioned rebound spiking after this photostimulation, but no systematic analysis of these post-inhibitory rebound effects has yet bee...",
      "review_bundle_ref": "analysis_bundle:ab-d9c479db9be9",
      "replication_status": "single_study",
      "review_package_ref": "analysis_bundle:ab-d9c479db9be9",
      "source_artifact_ref": "wiki_page:computationalreviewrecurrence-09-amplification-isn",
      "origin_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_09_evidence_package.json",
      "commit_sha": "79ce062d54a924ce05953ec90aa9d26044d2b48f",
      "created_by": "persona-jerome-lecoq-gbo-neuroscience",
      "repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence"
    }