Neuropixels recordings from GCaMP6f+ mice for Siegle, Ledochowitsch et al. (2021)

Zenodo (CERN European Organization for Nuclear Research) 2021

Joshua H. Siegle, Peter Ledochowitsch, Xiaoxuan Jia, Daniel Millman, Gabriel Koch Ocker, Shiella Caldejon, Linzy Casal, Andy Cho et al.

Abstract

NWB files for a novel Neuropixels electrophysiology dataset from transgenic mice expressing GCaMP6f, as well as additional wild type mice. This dataset was used in a comparison of electrophysiology and two-photon imaging data, which appears in Siegle, Ledochowitsch et al. (2021) eLife. For information about experimental procedures, see Siegle, Jia et al. (2021) Nature 592, 86-92 (https://www.nature.com/articles/s41586-020-03171-x). For information about file contents, see https://allensdk.readthedocs.io/en/latest/visual_coding_neuropixels.html Files were generated with a custom branch of the AllenSDK, available at https://github.com/jsiegle/allensdk/tree/ophys-ephys. We recommend using the same branch to interact with these files.

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