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All 7 Hypotheses 1 Papers 1 Wikis 1 Gaps 1 Colliders 0 Debates 1 Bounties 0 Missions 1 Work packets 1 Genes 0 Diseases 0 Phenotypes 0 Gene ontology 0

+ Hypotheses 1 + Papers 1 + Wikis 1 ✓ Gaps 1 + Colliders 0 + Debates 1 + Bounties 0 + Missions 1 ✓ Work packets 1 + Genes 0 + Diseases 0 + Phenotypes 0 + Gene ontology 0

30 results

Work packet [cross-disease-analogy] hypothesis:hypothesis-ec8b839c-6440-45dc-aff6-5edea1fd2d6d STMN2 Cryptic Exon Inclusion is the Earliest Loss-of-Function Marker of TDP-43 Nuclear Depletion in ALS Motor Neurons rel 1.00

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Work packet [cross-disease-analogy] hypothesis:hypothesis-h-6f6c9d3c TDP-43 condensation thermodynamics as a therapeutic target and biomarker for nuclear-cytoplasmic compartmentalization rel 1.00

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Work packet [cross-disease-analogy] hypothesis:hypothesis-h-72c719461c C9orf72 ASO Treatment Reverses TDP-43 Pathology in ALS/FTD rel 1.00

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Work packet [cross-disease-analogy] hypothesis:hypothesis-h-a23cc3c8b9 H3: G3BP1 as Nucleation Hub for TDP-43/FUS Seeding rel 1.00

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Work packet [cross-disease-analogy] hypothesis:hypothesis-h-alsmnd-54f981ca6a25 TIA1 Low-Complexity Domain Oxidation Drives Aberrant Stress Granule Assembly and TDP-43 Mislocalization in ALS Motor Neurons rel 1.00

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Work packet [cross-disease-analogy] hypothesis:hypothesis-h-ccc05373 p38α Inhibitor and PRMT1 Activator Combination to Restore Physiological TDP-43 Phosphorylation-Methylation Balance rel 1.00

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Work packet [cross-disease-analogy] hypothesis:hypothesis-h-ff0d545d HSPB1 Phosphorylation Mimetics to Promote Protective TDP-43 Liquid-Liquid Phase Separation rel 1.00

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Work packet [cross-disease-analogy] hypothesis:hypothesis-h-var-a0933e666d Microglial AIM2 Inflammasome as the Primary Driver of TDP-43 Proteinopathy Neuroinflammation in ALS/FTD rel 1.00

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Gap How does cytoplasmic TDP-43 accumulation cause loss of nuclear TDP-43 function? rel 0.65

TDP-43 accumulation is accompanied by loss of nuclear TDP

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Gap What mechanisms underlie TDP-43's contribution to cognitive impairment severity in AD patients? rel 0.53

TDP-43 pathology show worse cognitive impairment, but how TDP

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Gap Does TDP-43-mediated HK1 sequestration occur in other neurodegenerative diseases with TDP-43 pathology? rel 0.53

TDP-43 pathology occurs in frontotemporal dementia and other conditions

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Gap What mechanisms drive TDP-43 pathology specifically in Alzheimer's disease versus ALS/FTLD? rel 0.53

TDP-43 inclusions occur in AD, ALS, and FTLD but the pathogenic

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Gap How does TDP-43 regulation of HERV-K expression integrate with known TDP-43 pathology in ALS? rel 0.44

TDP-43 is shown to regulate HERV-K through LTR binding

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Gap What mechanisms explain why AD-TDP patients have greater disease severity than AD patients without TDP-43? rel 0.43

TDP-43 pathology. Gap type: unexplained_observation Source paper: TDP

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Gap How do ALS-associated TDP-43 mutations produce similar mRNA mislocalization as complete TDP-43 loss? rel 0.43

TDP-43 knockout effects on mRNA localization, suggesting a loss

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Gap What are the specific molecular mechanisms driving TDP-43 nuclear depletion and cytoplasmic accumulation? rel 0.42

TDP-43 pathology involving nuclear loss and cytoplasmic aggregation through

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Gap What molecular mechanisms underlie the RNA-dependent TDP-43-ATXN2 interaction and its role in ALS pathogenesis? rel 0.42

TDP-43 form an RNA-dependent complex that modifies TDP

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Gap What are the optimal therapeutic targets for preventing TDP-43 neurotoxicity versus pathological aggregation? rel 0.42

TDP-43 function restoration and aggregation prevention, but doesn't clarify

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Gap What upstream mechanisms cause TDP-43 to trigger mPTP opening and can this be therapeutically targeted? rel 0.42

TDP-43 triggers mPTP-mediated mtDNA release, the molecular mechanism

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Gap To what extent does TDP-43 dysfunction causally contribute to AD pathogenesis versus represent a consequence? rel 0.42

TDP-43 dysfunction is involved in AD pathogenesis. This fundamental

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Gap Why does p62 persist after stress granule and TDP-43 aggregate clearance during recovery? rel 0.42

TDP-43 aggregates resolve within 72 hours of stress removal

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Gap How does TDP-43 cytoplasmic redistribution mechanistically alter tau isoform ratios in disease states? rel 0.41

TDP-43 cytoplasmic redistribution with altered phosphorylation, and links this

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Gap What determines the specificity of TDP-43-induced mitochondrial DNA release for motor neurons versus other cell types in ALS? rel 0.41

TDP-43 triggers mtDNA release via mPTP to activate cGAS/STING

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Gap What determines the specificity of TDP-43 binding to HK1 versus other glycolytic enzymes? rel 0.32

TDP-43 specifically targets HK1 among glycolytic enzymes, but the molecular

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Gap How does TDP-43 proteinopathy mechanistically promote cell death following mechanical injury? rel 0.31

TDP-43 nuclear egress and that proteinopathy promotes cell death

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Gap How do loss-of-function and gain-of-function TDP-43 mechanisms interact to drive neurodegeneration? rel 0.31

TDP-43 causes neurodegeneration through both mechanisms but doesn't explain

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Gap How does microglial INPP5D deficiency non-cell-autonomously induce neuronal TDP-43 pathology? rel 0.31

TDP-43 pathology in a non-cell-autonomous manner, but the intercellular

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Gap How do dynamic UBQLN2 aggregates mechanistically promote cytoplasmic TDP-43 accumulation? rel 0.31

TDP-43 cytoplasmic accumulation but don't explain whether this

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Gap What upstream mechanisms initially trigger TDP-43 nuclear clearance and cytoplasmic mislocalization? rel 0.31

TDP-43 mislocalization as a pathologic hallmark but does not explain

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Gap What is the molecular mechanism by which TDP-43 couples mRNA destabilization to neurite exclusion? rel 0.31

TDP-43 binding regions mediate both mRNA instability and localization

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