Version history

{
  "version": "0.1.0",
  "summary": "Resolve a gene symbol or identifier to canonical metadata (HGNC, Ensembl, NCBI, function).",
  "runtime": "http_post",
  "runtime_config": {
    "url_env": "SCIDEX_V1_TOOLS_GENE_LOOKUP_URL",
    "url_default": "http://v1.scidex.ai/internal/tools/gene_lookup",
    "timeout_secs": 30
  },
  "input_schema": {
    "type": "object",
    "required": [
      "identifier"
    ],
    "properties": {
      "species": {
        "enum": [
          "human",
          "mouse",
          "rat",
          "zebrafish",
          "drosophila",
          "c_elegans"
        ],
        "type": "string",
        "default": "human"
      },
      "identifier": {
        "type": "string",
        "description": "Gene symbol (e.g. LRRK2), HGNC id, Ensembl id, or NCBI gene id."
      }
    }
  },
  "output_schema": {
    "type": "object",
    "properties": {
      "name": {
        "type": "string"
      },
      "symbol": {
        "type": "string"
      },
      "hgnc_id": {
        "type": "string"
      },
      "ncbi_id": {
        "type": "string"
      },
      "summary": {
        "type": "string"
      },
      "diseases": {
        "type": "array",
        "items": {
          "type": "string"
        }
      },
      "pathways": {
        "type": "array",
        "items": {
          "type": "string"
        }
      },
      "ensembl_id": {
        "type": "string"
      }
    }
  },
  "examples": [
    {
      "input": {
        "species": "human",
        "identifier": "LRRK2"
      }
    }
  ],
  "lifecycle_state": "active"
}