Version history

{
  "version": "0.1.0",
  "summary": "Resolve a protein identifier to UniProt metadata (sequence, function, domains, PTMs).",
  "runtime": "http_post",
  "runtime_config": {
    "url_env": "SCIDEX_V1_TOOLS_UNIPROT_LOOKUP_URL",
    "url_default": "http://v1.scidex.ai/internal/tools/uniprot_lookup",
    "timeout_secs": 30
  },
  "input_schema": {
    "type": "object",
    "required": [
      "identifier"
    ],
    "properties": {
      "identifier": {
        "type": "string",
        "description": "UniProt accession or gene symbol."
      },
      "include_sequence": {
        "type": "boolean",
        "default": false
      }
    }
  },
  "output_schema": {
    "type": "object",
    "properties": {
      "gene": {
        "type": "string"
      },
      "name": {
        "type": "string"
      },
      "ptms": {
        "type": "array",
        "items": {
          "type": "object"
        }
      },
      "domains": {
        "type": "array",
        "items": {
          "type": "object"
        }
      },
      "function": {
        "type": "string"
      },
      "organism": {
        "type": "string"
      },
      "sequence": {
        "type": "string"
      },
      "accession": {
        "type": "string"
      }
    }
  },
  "examples": [
    {
      "input": {
        "identifier": "Q5S007",
        "include_sequence": false
      },
      "description": "LRRK2 human UniProt entry."
    }
  ],
  "lifecycle_state": "active"
}