Details

kind
infographic
prompt
PV basket cells show strong SWR activation in healthy hippocampus but selective impairment in AD and ASD models, while other PV subtypes can be spared
provider
other
section_id
section_09_evidence_package
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewPV/blob/df9fc7e8d455b084152c9d713558dae0013cef21/evidence/section_09_evidence_package.json
target_ref
wiki_page:computationalreviewpv-09
review_repo
ComputationalReviewPV
section_ref
wiki_page:computationalreviewpv-09
source_path
evidence/section_09_evidence_package.json
section_title
Brain Region and Layer Context: Beyond Primary Sensory Cortex
generation_status
complete
review_bundle_ref
analysis_bundle:ab-e6261c8263e7
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewPV/blob/df9fc7e8d455b084152c9d713558dae0013cef21/evidence/section_09_evidence_package.json
commit_sha
df9fc7e8d455b084152c9d713558dae0013cef21
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewPV
Raw fields (3)
raw_fields
{
  "papers": [
    {
      "n": 0,
      "doi": "10.1098/rstb.2012.0518",
      "value": "strongly increased",
      "method": "juxtacellular recording with post-hoc identification",
      "metric": "PV basket cell firing rate change during SWRs",
      "n_analyzed": null,
      "ci_or_error": null,
      "text_access": "fulltext",
      "n_definition": "identified interneurons recorded in vivo",
      "scope_region": "hippocampal CA1 and CA3",
      "study_system": "rat/mouse hippocampus CA1/CA3",
      "taxonomic_level": "fine type",
      "scope_population": "PV-expressing basket cells",
      "value_source_sentence": "Parvalbumin-expressing basket cells fire phase locked to field gamma activity in both CA1 and CA3, and also strongly increase firing during SWRs.",
      "experimental_conditions": "healthy, in vivo recordings"
    },
    {
      "n": 0,
      "doi": "10.1523/JNEUROSCI.0425-20.2020",
      "value": "46% reduction",
      "method": "calcium imaging, cell-attached, whole-cell recordings",
      "metric": "PV basket cell spike rate during SWRs",
      "n_analyzed": null,
      "ci_or_error": null,
      "text_access": "fulltext",
      "n_definition": "PV basket cells recorded during SWRs",
      "scope_region": "hippocampal CA1",
      "study_system": "5xFAD mouse hippocampal CA1 slices",
      "taxonomic_level": "fine type",
      "scope_population": "PV-expressing basket cells",
      "value_source_sentence": "We observed a 46% spike rate reduction during SWRs in PV basket cells (PVBCs), while PV bistratified and axo-axonic cells were unimpaired.",
      "experimental_conditions": "3-month 5xFAD vs controls, ex vivo"
    },
    {
      "n": 0,
      "doi": "10.1016/j.celrep.2021.109970",
      "value": "reduced PV density with altered SWRs",
      "method": "silicon probe LFP, patch-clamp, immunohistochemistry",
      "metric": "PV interneuron density and SWR alteration",
      "n_analyzed": null,
      "ci_or_error": null,
      "text_access": "fulltext",
      "n_definition": "mice per genotype",
      "scope_region": "hippocampal CA1",
      "study_system": "Cntnap2-/- mouse hippocampus",
      "taxonomic_level": "broad category",
      "scope_population": "all PV interneurons",
      "value_source_sentence": "Cntnap2-/- mice show a reduction in hippocampal PV interneuron density, reduced inhibitory input to CA1 pyramidal cells, and frequency-dependent circuit changes including alterations in gamma oscillations, sharp-wave ripples, and theta-gamma modulation.",
      "experimental_conditions": "Cntnap2 knockout vs controls"
    }
  ],
  "comparison_id": "pv-basket-swr-firing-rate-change",
  "comparison_name": "PV basket cell firing rate changes during sharp-wave ripples: healthy vs disease models",
  "comparison_type": "cross-study conflict",
  "what_it_reveals": "PV basket cells show strong SWR activation in healthy hippocampus but selective impairment in AD and ASD models, while other PV subtypes can be spared",
  "homogeneity_check": {
    "caveats": [
      "Different disease models and preparations",
      "Third paper reports all PV cells without subtype distinction"
    ],
    "n_definition_uniform": "false",
    "scope_region_uniform": "true",
    "taxonomic_level_uniform": "false",
    "scope_population_uniform": "false"
  },
  "suggested_plot_type": "grouped bar"
}
source_refs
[
  "paper:paper-12b8963c5eea",
  "paper:paper-54726517a4fb",
  "paper:paper-78f33d23c109"
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "df9fc7e8d455b084152c9d713558dae0013cef21",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewPV"
}

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