Details

kind
infographic
prompt
Species Differences and Human Disease figure 3
provider
other
section_id
section_12_evidence_package
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewAstrocytes/blob/1a55da0634a3bc04e5688792ed12141ce271d28e/evidence/section_12_evidence_package.json
target_ref
wiki_page:computationalreviewastrocytes-12
review_repo
ComputationalReviewAstrocytes
section_ref
wiki_page:computationalreviewastrocytes-12
source_path
evidence/section_12_evidence_package.json
section_title
Species Differences and Human Disease
generation_status
complete
review_bundle_ref
analysis_bundle:ab-029ee9411fe2
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewAstrocytes/blob/1a55da0634a3bc04e5688792ed12141ce271d28e/evidence/section_12_evidence_package.json
commit_sha
1a55da0634a3bc04e5688792ed12141ce271d28e
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewAstrocytes
Raw fields (3)
raw_fields
{
  "axis": {
    "x": "Genotype",
    "y": "Resting intracellular [Ca²⁺] (nM)"
  },
  "notes": "Alzheimer's disease models exhibit nearly doubled resting astrocyte Ca²⁺, aberrant long-range calcium waves, and downstream pathological cascades (complement, ApoE aggregation) that are ameliorated by targeting astrocyte-associated pathways such as C3.",
  "theme": "Astrocyte calcium dysregulation in Alzheimer's disease models",
  "papers": [
    "10.1126/science.1169096",
    "10.1126/scitranslmed.aaf6295",
    "10.1186/s13024-022-00566-4"
  ],
  "datapoints": [
    {
      "doi": "10.1126/science.1169096",
      "group": "Wild-type mouse cortical astrocytes / APPswe/PS1d9 transgenic mouse cortical astrocytes / AD model – intercellular Ca²⁺ wave spread distance (plaque-bearing only) / AD model – correlated astrocyte activity distance",
      "units": "nM",
      "value": 81,
      "values": {
        "Wild-type mouse cortical astrocytes": 81,
        "APPswe/PS1d9 transgenic mouse cortical astrocytes": 149,
        "AD model – correlated astrocyte activity distance": 200,
        "AD model – intercellular Ca²⁺ wave spread distance (plaque-bearing only)": 200
      },
      "source_sentence": "Furthermore, rare intercellular calcium waves were observed, but only in mice with amyloid-β plaques, originating near plaques and spreading radially at least 200 µm.",
      "value_source_sentence": "Furthermore, rare intercellular calcium waves were observed, but only in mice with amyloid-β plaques, originating near plaques and spreading radially at least 200 µm."
    },
    {
      "doi": "10.1126/scitranslmed.aaf6295",
      "group": "APP/PS1;C3 KO – CA3 neuron loss rescued (vs 40% loss in APP/PS1)",
      "units": "% neuron loss rescued",
      "value": 40,
      "values": {
        "APP/PS1;C3 KO – CA3 neuron loss rescued (vs 40% loss in APP/PS1)": 40
      },
      "source_sentence": "A stronger (40%) reduction in CA3 neurons was seen from P30 to 16 months of age in APP/PS1 mice ( p < 0.",
      "value_source_sentence": "A stronger (40%) reduction in CA3 neurons was seen from P30 to 16 months of age in APP/PS1 mice ( p < 0."
    },
    {
      "doi": "10.1186/s13024-022-00566-4",
      "group": "APOE4/4 AD – ApoE particle size vs APOE3/3",
      "units": "fold larger",
      "value": 2,
      "values": {
        "APOE4/4 AD – ApoE particle size vs APOE3/3": 2
      },
      "source_sentence": "For instance, a study comparing apoE particle size from temporal lobe brain homogenates of AD and control patients by size-exclusion chromatography found that apoE particles in APOE4/4 patients were twice as big as those from APOE3/3 AD patients and APOE3/3 control subjects [ 125 ].",
      "value_source_sentence": "For instance, a study comparing apoE particle size from temporal lobe brain homogenates of AD and control patients by size-exclusion chromatography found that apoE particles in APOE4/4 patients were twice as big as those from APOE3/3 AD patients and APOE3/3 control subjects [ 125 ]."
    }
  ],
  "comparison_id": "alzheimer_astrocyte_calcium"
}
source_refs
[
  "paper:paper-41dc0509f7cf",
  "paper:paper-d74c3cfc15b9",
  "paper:paper-290ca86a608f",
  "paper:paper-a83e8d05b731"
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "1a55da0634a3bc04e5688792ed12141ce271d28e",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewAstrocytes"
}

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