Version history

1 version on record. Newest first; the live version sits at the top with a live indicator.

  1. Live 632d61d328d7
    5/17/2026, 4:35:28 PM
    Content snapshot
    {
      "kind": "infographic",
      "prompt": "Neuromodulatory changes during brain state transitions (wake-NREM-REM)",
      "provider": "other",
      "raw_fields": {
        "title": "Neuromodulatory changes during brain state transitions (wake-NREM-REM)",
        "papers": [
          {
            "n": 16,
            "doi": "10.1126/science.adq5233",
            "value": "200 nM",
            "n_analyzed": 16,
            "n_definition": "varies by study",
            "scope_region": "brain-wide / specific regions per study",
            "study_system": "computational model",
            "scope_population": "computational model",
            "value_source_sentence": "( H ) Experimental schematic:  in vivo  widefield imaging during chemogenetic activation of  Tg(gfap:rTRPV1-eGFP)  fish with 200 nM capsaicin in the presence of a neural activity blocker (170 mg/L MS-"
          },
          {
            "n": null,
            "doi": "10.1016/j.neuron.2025.02.004",
            "value": "50%",
            "n_analyzed": null,
            "n_definition": "varies by study",
            "scope_region": "brain-wide / specific regions per study",
            "study_system": "rat",
            "scope_population": "rat",
            "value_source_sentence": "N1 is the transitional phase between wakefulness and sleep, occurring when more than 50% of alpha waves in electroencephalogram (EEG) recordings are replaced with low-amplitude, mixed-frequency activi"
          },
          {
            "n": 29,
            "doi": "10.1126/sciadv.adi0643",
            "value": "100 μM",
            "n_analyzed": 29,
            "n_definition": "varies by study",
            "scope_region": "brain-wide / specific regions per study",
            "study_system": "rat",
            "scope_population": "rat",
            "value_source_sentence": "0  sensor under baseline and with 100 μM ACh."
          },
          {
            "n": null,
            "doi": "10.3390/ijms262110766",
            "value": "20%",
            "n_analyzed": null,
            "n_definition": "varies by study",
            "scope_region": "brain-wide / specific regions per study",
            "study_system": "rat",
            "scope_population": "rat",
            "value_source_sentence": "provided direct electrophysiological evidence that cortical pyramidal neurons and hippocampal granule cells exhibit statistically significant daily fluctuations in membrane capacitance, with amplitude"
          },
          {
            "n": null,
            "doi": "10.3389/fnins.2024.1426189",
            "value": "4 Hz",
            "n_analyzed": null,
            "n_definition": "varies by study",
            "scope_region": "brain-wide / specific regions per study",
            "study_system": "mouse",
            "scope_population": "mouse",
            "value_source_sentence": "5–4 Hz oscillatory activity which occur within NREM sleep as the result of the simultaneous activation and subsequent inactivation of large neural populations."
          },
          {
            "n": null,
            "doi": "10.3389/fncel.2025.1606265",
            "value": "4 Hz",
            "n_analyzed": null,
            "n_definition": "varies by study",
            "scope_region": "brain-wide / specific regions per study",
            "study_system": "rat",
            "scope_population": "rat",
            "value_source_sentence": "5–4 Hz ( Kim et al."
          },
          {
            "n": null,
            "doi": "10.1371/journal.pcbi.1012262",
            "value": "50%",
            "n_analyzed": null,
            "n_definition": "varies by study",
            "scope_region": "brain-wide / specific regions per study",
            "study_system": "rat",
            "scope_population": "rat",
            "value_source_sentence": "Notably, the number of thalamo-cortical outgoing axons is approximately one-tenth of the number of cortico-thalamic incoming axons [ 4 ,  5 ], and the cortex is the major source of synapses within the"
          },
          {
            "n": null,
            "doi": "10.3389/fnagi.2025.1632236",
            "value": "60%",
            "n_analyzed": null,
            "n_definition": "varies by study",
            "scope_region": "brain-wide / specific regions per study",
            "study_system": "rat",
            "scope_population": "rat",
            "value_source_sentence": "Histological evidence indicates that the number of LC neurons decreases by 60% in AD patients ( Mann et al."
          }
        ],
        "x_axis": "Brain state (Wake / NREM / REM)",
        "y_axis": "Relative neuromodulator activity",
        "figure_id": "fig_sec8_state_transitions_modulator",
        "comparison_type": "cross-modulator state-dependent activity comparison",
        "homogeneity_check": {
          "caveats": [
            "Different modulators measured with different techniques across studies",
            "Wake/NREM/REM classifications may differ between labs",
            "Activity measures vary: firing rate, release, sensor signal"
          ],
          "comparable": true
        }
      },
      "section_id": "section_08_evidence",
      "source_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewNeuromodulation/blob/95db5c630fe54e183d9c452cf826ce502d4a872d/evidence/section_08_evidence.json",
      "target_ref": "wiki_page:computationalreviewneuromodulation-08",
      "review_repo": "ComputationalReviewNeuromodulation",
      "section_ref": "wiki_page:computationalreviewneuromodulation-08",
      "source_path": "evidence/section_08_evidence.json",
      "source_refs": [
        "paper:paper-2f2d9a7ca2d6",
        "paper:paper-4589708b8bef",
        "paper:paper-4bb1fd558795",
        "paper:paper-583fee8051cd",
        "paper:paper-943ff5b178ab",
        "paper:paper-9ba29c77ce3c",
        "paper:paper-d0678479a944",
        "paper:paper-fdba5225b90e"
      ],
      "section_title": "Cross-System Interactions and Brain-Wide States",
      "source_policy": {
        "mode": "public_source_pointer_with_short_context",
        "notes": [
          "Local review repositories are read-only inputs.",
          "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
        ],
        "source_commit_sha": "95db5c630fe54e183d9c452cf826ce502d4a872d",
        "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewNeuromodulation"
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      "generation_status": "complete",
      "review_bundle_ref": "analysis_bundle:ab-a3dbbaf9b625",
      "origin_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewNeuromodulation/blob/95db5c630fe54e183d9c452cf826ce502d4a872d/evidence/section_08_evidence.json",
      "commit_sha": "95db5c630fe54e183d9c452cf826ce502d4a872d",
      "created_by": "persona-jerome-lecoq-gbo-neuroscience",
      "repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewNeuromodulation"
    }