Details

scope
human MTG (snRNA-seq); cross-reference to Boldog 2018 rosehip discovery
section_id
section_03
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_03_evidence_package.json
effect_size
1 transcriptomic type (Inh L1-4 LAMP5 LCP2) corresponds to rosehip cells; spans L1-L4
review_repo
ComputationalReviewVIP
section_ref
wiki_page:computationalreviewvip-03-development
source_kind
review_finding
source_path
evidence/section_03_evidence_package.json
source_span
Inh L1-4 LAMP5 LCP2 matched rosehip cells ( Extended Data Fig. 5d ), discovered in L1 14 but present in all cortical layers.
study_system
human MTG (snRNA-seq); cross-reference to Boldog 2018 rosehip discovery
section_title
Developmental Origins and Postnatal Maturation
evidence_summary
Cross-mapping of published rosehip-cell single-cell RNA-seq (Boldog 2018) to human MTG taxonomy; layer-resolved snRNA-seq.
review_bundle_ref
analysis_bundle:ab-2ce40c33e827
replication_status
replicated
review_package_ref
analysis_bundle:ab-2ce40c33e827
source_artifact_ref
wiki_page:computationalreviewvip-03-development
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_03_evidence_package.json
commit_sha
95e761177f7d2ec565983d3307c14ec238f9677c
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewVIP
Raw fields (5)
claim_text
Human cortical 'rosehip' cells, originally described as a primate-specific layer-1 GABAergic interneuron subtype, correspond transcriptomically to the Inh L1-4 LAMP5 LCP2 type — although they are present across multiple cortical layers despite their initial L1 description, refining their developmental and morphological classification within the CGE-derived LAMP5/PAX6 subclass.
raw_fields
{
  "n": null,
  "doi": "10.1038/s41586-019-1506-7",
  "claim": "Human cortical 'rosehip' cells, originally described as a primate-specific layer-1 GABAergic interneuron subtype, correspond transcriptomically to the Inh L1-4 LAMP5 LCP2 type — although they are present across multiple cortical layers despite their initial L1 description, refining their developmental and morphological classification within the CGE-derived LAMP5/PAX6 subclass.",
  "title": null,
  "cite_key": "Hodge2019",
  "evidence": "Cross-mapping of published rosehip-cell single-cell RNA-seq (Boldog 2018) to human MTG taxonomy; layer-resolved snRNA-seq.",
  "effect_size": "1 transcriptomic type (Inh L1-4 LAMP5 LCP2) corresponds to rosehip cells; spans L1-L4",
  "figure_data": [],
  "text_access": "fulltext",
  "study_system": "human MTG (snRNA-seq); cross-reference to Boldog 2018 rosehip discovery",
  "_source_cluster": "cluster_02_development_lineage",
  "replication_status": "replicated",
  "_source_cluster_index": 110,
  "claim_source_sentence": "Inh L1-4 LAMP5 LCP2 matched rosehip cells ( Extended Data Fig. 5d ), discovered in L1 14 but present in all cortical layers.",
  "replication_evidence_dois": [
    "10.1038/s41593-018-0205-2"
  ],
  "effect_size_source_sentence": "Inh L1-4 LAMP5 LCP2 matched rosehip cells ( Extended Data Fig. 5d ), discovered in L1 14 but present in all cortical layers."
}
source_refs
[
  "paper:paper-pm-31435019"
]
evidence_refs
[
  {
    "ref": "paper:paper-pm-31435019"
  }
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "95e761177f7d2ec565983d3307c14ec238f9677c",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP"
}

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