Details

scope
C57BL/6J mouse brain; AAV-EGFP anterograde tracing imaged with serial two-photon tomography
claim_text
The Allen Mouse Brain Connectivity Atlas provides a brain-wide cellular-level mesoscale connectome for the mouse using AAV tracers and serial two-photon tomography.
section_id
section_12
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewLoops/blob/0632aae8abc141909207fe91f6349b9e36489c3b/evidence/section_12_evidence_package.json
review_repo
ComputationalReviewLoops
section_ref
wiki_page:computationalreviewloops-12
source_kind
review_finding
source_path
evidence/section_12_evidence_package.json
study_system
C57BL/6J mouse brain; AAV-EGFP anterograde tracing imaged with serial two-photon tomography
section_title
Whole-Brain Connectomics: Mouse, Primate, Human
evidence_summary
Foundational landmark establishing the standardized AAV+STPT framework for whole-brain mouse mesoscale connectivity.
review_bundle_ref
analysis_bundle:ab-d49e54403ef9
replication_status
independently_replicated
review_package_ref
analysis_bundle:ab-d49e54403ef9
source_artifact_ref
wiki_page:computationalreviewloops-12
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewLoops/blob/0632aae8abc141909207fe91f6349b9e36489c3b/evidence/section_12_evidence_package.json
commit_sha
0632aae8abc141909207fe91f6349b9e36489c3b
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewLoops
Raw fields (5)
raw_fields
{
  "n": 0,
  "doi": "10.1038/nature13186",
  "claim": "The Allen Mouse Brain Connectivity Atlas provides a brain-wide cellular-level mesoscale connectome for the mouse using AAV tracers and serial two-photon tomography.",
  "cite_key": "Oh2014",
  "evidence": "Foundational landmark establishing the standardized AAV+STPT framework for whole-brain mouse mesoscale connectivity.",
  "effect_size": null,
  "text_access": "abstract_only",
  "study_system": "C57BL/6J mouse brain; AAV-EGFP anterograde tracing imaged with serial two-photon tomography",
  "source_cluster_id": "cluster_11",
  "replication_status": "independently_replicated",
  "claim_source_sentence": "The Allen Mouse Brain Connectivity Atlas uses enhanced green fluorescent protein (EGFP)-expressing adeno-associated viral vectors to trace axonal projections from defined regions and cell types, and high-throughput serial two-photon tomography to image the EGFP-labelled axons throughout the brain.",
  "replication_evidence_dois": [
    "10.1162/netn_a_00066",
    "10.1038/s41586-019-1716-z",
    "10.1016/j.cell.2014.02.023"
  ],
  "effect_size_source_sentence": null
}
source_refs
[
  "paper:paper-bb5df5f7b66e"
]
source_span
The Allen Mouse Brain Connectivity Atlas uses enhanced green fluorescent protein (EGFP)-expressing adeno-associated viral vectors to trace axonal projections from defined regions and cell types, and high-throughput serial two-photon tomography to image the EGFP-labelled axons throughout the brain.
evidence_refs
[
  {
    "ref": "paper:paper-bb5df5f7b66e"
  }
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "0632aae8abc141909207fe91f6349b9e36489c3b",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewLoops"
}

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