Details

scope
mouse vibrissal M1 (vM1) slices; ChR2-assisted circuit mapping
claim_text
In mouse vibrissal primary motor cortex, channelrhodopsin-2-assisted circuit mapping shows that long-range cortical and thalamic inputs to pyramidal neurons each adopt a distinct laminar profile that together tile all cortical layers.
section_id
section_04
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_04_evidence_package.json
effect_size
qualitative laminar segregation (no single number reported in abstract)
review_repo
ComputationalReviewRecurrence
section_ref
wiki_page:computationalreviewrecurrence-04-translaminar
source_kind
review_finding
source_path
evidence/section_04_evidence_package.json
source_span
Each projection innervated vM1 pyramidal neurons with a unique laminar profile. Collectively, the profiles for different sources of input partially overlapped and spanned all cortical layers.
study_system
mouse vibrissal M1 (vM1) slices; ChR2-assisted circuit mapping
section_title
4. Translaminar excitatory loops in mouse — L4→L2/3→L5→L6→L4 within the column; asymmetry of forward and backward intracortical projections
evidence_summary
Optogenetic stimulation of axons from orbital cortex, secondary motor cortex, and motor- and sensory-related thalamic regions produced layer-specific excitatory inputs (OC→L6; M2→L5B; VA/VL→L2/3-L5B avoiding L6; POm and S1→L2/3 and L5A).
review_bundle_ref
analysis_bundle:ab-d9c479db9be9
replication_status
consistent with subsequent vM1 input maps (Yamawaki 2014, 2015)
review_package_ref
analysis_bundle:ab-d9c479db9be9
source_artifact_ref
wiki_page:computationalreviewrecurrence-04-translaminar
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_04_evidence_package.json
commit_sha
79ce062d54a924ce05953ec90aa9d26044d2b48f
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence
Raw fields (4)
raw_fields
{
  "n": "mouse vM1, slice optogenetics + whole-cell, n not stated in abstract",
  "doi": "10.1523/jneurosci.4338-12.2013",
  "claim": "In mouse vibrissal primary motor cortex, channelrhodopsin-2-assisted circuit mapping shows that long-range cortical and thalamic inputs to pyramidal neurons each adopt a distinct laminar profile that together tile all cortical layers.",
  "cite_key": "Hooks2013",
  "evidence": "Optogenetic stimulation of axons from orbital cortex, secondary motor cortex, and motor- and sensory-related thalamic regions produced layer-specific excitatory inputs (OC→L6; M2→L5B; VA/VL→L2/3-L5B avoiding L6; POm and S1→L2/3 and L5A).",
  "effect_size": "qualitative laminar segregation (no single number reported in abstract)",
  "text_access": "abstract_only",
  "study_system": "mouse vibrissal M1 (vM1) slices; ChR2-assisted circuit mapping",
  "argument_role": "supporting",
  "replication_status": "consistent with subsequent vM1 input maps (Yamawaki 2014, 2015)",
  "claim_source_sentence": "Each projection innervated vM1 pyramidal neurons with a unique laminar profile. Collectively, the profiles for different sources of input partially overlapped and spanned all cortical layers.",
  "source_provenance_status": "ok",
  "replication_evidence_dois": [
    "10.7554/eLife.05422"
  ],
  "effect_size_source_sentence": "Specifically, orbital cortex (OC) inputs primarily targeted neurons in L6. Secondary motor cortex (M2) inputs excited neurons mainly in L5B, including pyramidal tract neurons."
}
source_refs
[
  "paper:fc06108f-75bb-4dd7-9d5e-3b006f8c4156"
]
evidence_refs
[
  {
    "ref": "paper:fc06108f-75bb-4dd7-9d5e-3b006f8c4156"
  }
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "79ce062d54a924ce05953ec90aa9d26044d2b48f",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence"
}

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