Details

scope
Mouse S1; large-scale array-tomography (~0.17 mm³ volume); EM cross-validation
section_id
section_04
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_04_evidence_package.json
effect_size
Reconstructed volume: ~0.17 mm³ (1 × 0.83 × 0.21 mm).
review_repo
ComputationalReviewRecurrence
section_ref
wiki_page:computationalreviewrecurrence-04-translaminar
source_kind
review_finding
source_path
evidence/section_04_evidence_package.json
source_span
We then use large-scale array tomography (LSAT) to measure TC synapse distribution on L5 pyramidal neurons in a 1.00 × 0.83 × 0.21 mm(3) volume of mouse somatosensory cortex.
study_system
Mouse S1; large-scale array-tomography (~0.17 mm³ volume); EM cross-validation
section_title
4. Translaminar excitatory loops in mouse — L4→L2/3→L5→L6→L4 within the column; asymmetry of forward and backward intracortical projections
evidence_summary
Large-scale array tomography volume reconstruction in mouse S1 with quantitative thalamocortical-synapse mapping onto L5 pyramidal neurons; parallel EM validation in L4.
review_bundle_ref
analysis_bundle:ab-d9c479db9be9
replication_status
single_study
review_package_ref
analysis_bundle:ab-d9c479db9be9
source_artifact_ref
wiki_page:computationalreviewrecurrence-04-translaminar
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_04_evidence_package.json
commit_sha
79ce062d54a924ce05953ec90aa9d26044d2b48f
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence
Raw fields (5)
claim_text
Quantitative array tomography of a ~1 × 0.83 × 0.21 mm³ volume of mouse S1 enables synapse-level mapping of thalamocortical inputs onto whole L5 pyramidal cells, providing a quantitative anatomical method scalable to entire neuron dendritic trees.
raw_fields
{
  "n": 0,
  "doi": "10.3389/fncir.2013.00177",
  "claim": "Quantitative array tomography of a ~1 × 0.83 × 0.21 mm³ volume of mouse S1 enables synapse-level mapping of thalamocortical inputs onto whole L5 pyramidal cells, providing a quantitative anatomical method scalable to entire neuron dendritic trees.",
  "cite_key": "Rah2013",
  "evidence": "Large-scale array tomography volume reconstruction in mouse S1 with quantitative thalamocortical-synapse mapping onto L5 pyramidal neurons; parallel EM validation in L4.",
  "effect_size": "Reconstructed volume: ~0.17 mm³ (1 × 0.83 × 0.21 mm).",
  "text_access": "abstract_only",
  "study_system": "Mouse S1; large-scale array-tomography (~0.17 mm³ volume); EM cross-validation",
  "argument_role": "supporting",
  "replication_status": "single_study",
  "claim_source_sentence": "We then use large-scale array tomography (LSAT) to measure TC synapse distribution on L5 pyramidal neurons in a 1.00 × 0.83 × 0.21 mm(3) volume of mouse somatosensory cortex.",
  "source_provenance_status": "non_substring_match",
  "replication_evidence_dois": [],
  "effect_size_source_sentence": "We then use large-scale array tomography (LSAT) to measure TC synapse distribution on L5 pyramidal neurons in a 1.00 × 0.83 × 0.21 mm(3) volume of mouse somatosensory cortex."
}
source_refs
[
  "paper:a3fcf790-bfc9-4b6d-a52d-f08e1ebfbc00"
]
evidence_refs
[
  {
    "ref": "paper:a3fcf790-bfc9-4b6d-a52d-f08e1ebfbc00"
  }
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "79ce062d54a924ce05953ec90aa9d26044d2b48f",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence"
}

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