Details

scope
human MTG L1; Patch-seq + snRNA-seq
section_id
section_01
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_01_evidence_package.json
review_repo
ComputationalReviewVIP
section_ref
wiki_page:computationalreviewvip-01-introduction
source_kind
review_finding
source_path
evidence/section_01_evidence_package.json
study_system
human MTG L1; Patch-seq + snRNA-seq
section_title
Introduction
evidence_summary
Patch-seq + snRNA-seq of human L1 cortex; rosehip type lacks mouse homolog; multiple VIP+ L1 clusters share marker signatures with mouse Vip+ types — confirming both conserved CGE-derived VIP types and human-specific innovations.
review_bundle_ref
analysis_bundle:ab-2ce40c33e827
replication_status
replicated
review_package_ref
analysis_bundle:ab-2ce40c33e827
source_artifact_ref
wiki_page:computationalreviewvip-01-introduction
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_01_evidence_package.json
commit_sha
95e761177f7d2ec565983d3307c14ec238f9677c
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewVIP
Raw fields (6)
claim_text
Boldog et al. (2018) identified a human-specific cortical interneuron type ('rosehip cell') in human L1 not matching any mouse Vip/Sst/Pvalb cluster, while several other human L1 t-types (i6, i8, i9, i10, i11) matched mouse Vip+ types, supporting both conserved and human-specific elaboration of CGE-derived interneurons.
raw_fields
{
  "n": null,
  "doi": "10.1038/s41593-018-0205-2",
  "claim": "Boldog et al. (2018) identified a human-specific cortical interneuron type ('rosehip cell') in human L1 not matching any mouse Vip/Sst/Pvalb cluster, while several other human L1 t-types (i6, i8, i9, i10, i11) matched mouse Vip+ types, supporting both conserved and human-specific elaboration of CGE-derived interneurons.",
  "title": null,
  "cite_key": "Boldog2018",
  "evidence": "Patch-seq + snRNA-seq of human L1 cortex; rosehip type lacks mouse homolog; multiple VIP+ L1 clusters share marker signatures with mouse Vip+ types — confirming both conserved CGE-derived VIP types and human-specific innovations.",
  "effect_size": null,
  "text_access": "fulltext",
  "study_system": "human MTG L1; Patch-seq + snRNA-seq",
  "target_section": "section_02",
  "_source_cluster": "cluster_01_molecular_taxonomy",
  "replication_status": "replicated",
  "_source_cluster_index": 33,
  "claim_source_sentence": "Many rosehip marker genes are not expressed in Smad3 or other Pvalb/Sst/Vip-negative mouse cell types or the complete set of mouse GABAergic types. Clusters i6, i8, i9, i11, and i10 matched mouse Vip+ clusters, and cluster i2 matched mouse Sst+ clusters."
}
source_refs
[
  "paper:paper-pm-30150662"
]
source_span
Many rosehip marker genes are not expressed in Smad3 or other Pvalb/Sst/Vip-negative mouse cell types or the complete set of mouse GABAergic types. Clusters i6, i8, i9, i11, and i10 matched mouse Vip+ clusters, and cluster i2 matched mouse Sst+ clusters.
evidence_refs
[
  {
    "ref": "paper:paper-pm-30150662"
  }
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "95e761177f7d2ec565983d3307c14ec238f9677c",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP"
}

Voting as anonymous. Sign in to attribute your signals.

tokens

Replication

No replications yet

Discussion

Posting anonymously. Sign in for attribution.

No comments yet — be the first.