Details
- scope
- human neocortex layer 1; Patch-seq + snRNA-seq
- section_id
- section_04
- source_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_04_evidence_package.json
- effect_size
- rosehip = 13% (n=10/76) of L1 interneurons sampled
- review_repo
- ComputationalReviewVIP
- section_ref
- wiki_page:computationalreviewvip-04-morphology
- source_kind
- review_finding
- source_path
- evidence/section_04_evidence_package.json
- study_system
- human neocortex layer 1; Patch-seq + snRNA-seq
- section_title
- Morphological Diversity
- evidence_summary
- Single-nucleus RNA-seq + biocytin reconstructions of layer-1 interneurons from human neurosurgical tissue.
- review_bundle_ref
- analysis_bundle:ab-2ce40c33e827
- replication_status
- replicated
- review_package_ref
- analysis_bundle:ab-2ce40c33e827
- source_artifact_ref
- wiki_page:computationalreviewvip-04-morphology
- origin_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_04_evidence_package.json
- commit_sha
- 95e761177f7d2ec565983d3307c14ec238f9677c
- created_by
- persona-jerome-lecoq-gbo-neuroscience
- repository_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewVIP
Raw fields (6)
- claim_text
Human cortical layer 1 contains a novel rosehip interneuron with compact, bushy axonal arborizations and unusually large axonal boutons whose laminar arborization is largely confined to layer 1 — providing a contrast for evaluating the laminar specificity of mouse L1-projecting VIP cells.
- raw_fields
{ "n": 76, "doi": "10.1038/s41593-018-0205-2", "claim": "Human cortical layer 1 contains a novel rosehip interneuron with compact, bushy axonal arborizations and unusually large axonal boutons whose laminar arborization is largely confined to layer 1 — providing a contrast for evaluating the laminar specificity of mouse L1-projecting VIP cells.", "title": null, "cite_key": "Boldog2018", "evidence": "Single-nucleus RNA-seq + biocytin reconstructions of layer-1 interneurons from human neurosurgical tissue.", "effect_size": "rosehip = 13% (n=10/76) of L1 interneurons sampled", "text_access": "fulltext", "study_system": "human neocortex layer 1; Patch-seq + snRNA-seq", "_source_cluster": "cluster_03_morphology", "replication_status": "replicated", "_source_cluster_index": 22, "claim_source_sentence": "The axon of RCs usually emerged from the basal part of the soma and gave rise to very compact, dense axonal trees predominantly arborizing in layer 1 with tortuous collaterals having spindle-shaped boutons with diameters not seen in other types of human layer 1 interneurons in our sample.", "replication_evidence_dois": [ "10.1126/science.adf0805" ], "effect_size_source_sentence": "Light microscopic examination of these cells identified neurons with previously described morphological features, e.g. neurogliaform cells (NGFCs, n=16, 21%; Fig.2C,D ) 1 , 21 , 24 as well as a novel group of interneurons having large, rosehip-shaped axonal boutons forming very compact, bushy arborizations (rosehip cells, RCs, n=10, 13%; Fig.2A,D )." }- source_refs
[ "paper:paper-pm-30150662" ]
- source_span
The axon of RCs usually emerged from the basal part of the soma and gave rise to very compact, dense axonal trees predominantly arborizing in layer 1 with tortuous collaterals having spindle-shaped boutons with diameters not seen in other types of human layer 1 interneurons in our sample.
- evidence_refs
[ { "ref": "paper:paper-pm-30150662" } ]- source_policy
{ "mode": "public_source_pointer_with_short_context", "notes": [ "Local review repositories are read-only inputs.", "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose." ], "source_commit_sha": "95e761177f7d2ec565983d3307c14ec238f9677c", "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP" }