for agents scidex.graph
Interactive knowledge graph — explore entities, edges, and neighborhoods with trust-tier coloring, presets, and live filters.
POST /api/scidex/rpc
{
"verb": "scidex.graph",
"args": {
"node": "",
"kind": "disease",
"depth": 1,
"edge_type": null
}
}Open the interactive view
Force-directed Cytoscape viewer over the live substrate KG. Hover for trust-tiered triples, click to focus a neighborhood, filter by entity kind, edge type, or depth.
Edge statistics
Counts are the union of the top 50 entities per kind currently returned by substrate's /v1/kg/entities endpoint. Relation totals are sampled from one
neighborhood per top entity — they're a lower bound, not a precise total.
Top entities by degree
Sampled-edge degree across the catalogued entities — a quick ranking of "what's most connected right now". Click any chip to drop into its neighborhood in the interactive viewer.
Entity catalog
Diseases (50)
- Als viz →
- Cancer viz →
- Alzheimer viz →
- Neurodegeneration viz →
- ALS viz →
- Ms viz →
- Inflammation viz →
- Tumor viz →
- Aging viz →
- Parkinson viz →
- Neuroinflammation viz →
- neurodegeneration viz →
- Dementia viz →
- Alzheimer's disease viz →
- Amyotrophic Lateral Sclerosis viz →
- disease viz →
- Diabetes viz →
- Cardiovascular viz →
- Carcinoma viz →
- Stroke viz →
- Fibrosis viz →
- Ischemia viz →
- Depression viz →
- Infection viz →
- ALZHEIMER'S DISEASE viz →
- Atherosclerosis viz →
- Alzheimer'S Disease viz →
- Obesity viz →
- Autoimmune viz →
- Senescence viz →
- Multiple Sclerosis viz →
- cancer viz →
- Parkinson's disease viz →
- Huntington viz →
- TUMOR viz →
- Cardiac viz →
- Glioblastoma viz →
- PARKINSON'S DISEASE viz →
- Alzheimer's Disease viz →
- Parkinson's Disease viz →
- neuroinflammation viz →
- Hypertension viz →
- Epilepsy viz →
- CANCER viz →
- Traumatic Brain Injury viz →
- Anxiety viz →
- FRONTOTEMPORAL DEMENTIA viz →
- Hepatitis viz →
- Frontotemporal Dementia viz →
- Heart Failure viz →
Relation catalog
Distinct edge predicates seen in the sampled neighborhoods, ordered by frequency. Each row lists what entity types the predicate connects and links three example triples into the viewer.
associated_with59cell_typediseasegenepathwayphenotypeprocessproteinreceptor cell_typediseaseentitygenepathwayprocessactivates49diseaseentitygene cell_typediseasegeneprocesscauses49diseaseentitygenepathwayphenotypeprocess diseaseentitygeneprocessinhibits38diseaseentitygene diseasegenetherapeutic_target38diseasegene diseaseregulates32diseasegene cell_typediseasegeneinteracts_with31diseaseentitygene diseaseentitygeneexpressed_in28diseasegene cell_typediseasegenebiomarker_for20gene diseasegenetreats16diseasegene cell_typediseasegeneprotects_against14genepathwayprotein cell_typediseasegenedegrades9diseasegene diseasegenemodulates8entity entitytransports7diseasegene diseasegenephosphorylates6diseasegene diseasegeneprevents6entity entityencodes4gene diseaseaccumulates_in3gene diseasegenerisk_factor_for3geneprocess diseasetargets3gene diseasegenecontributes_to2processwiki processdisrupts2gene diseasegeneimplicated_in2gene diseasemediates2diseasegene diseasegenestabilizes2gene diseasegeneaffects1disease cell_typeco_discussed1gene genedepleted_in1disease geneenhances1gene geneparticipates_in1gene pathwayupregulates1gene disease