Details
- scope
- mouse M1 cortex; Patch-seq
- claim_text
- Scala et al. (2021) identified a transcriptomically isolated Vip Lamp5 Lhx6 t-type that corresponds morphologically to deep L5/L6 neurogliaform cells (NGCs), an exception to the typical upper-layer Vip distribution.
- section_id
- section_02
- source_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_02_evidence_package.json
- review_repo
- ComputationalReviewVIP
- section_ref
- wiki_page:computationalreviewvip-02-classification
- source_kind
- review_finding
- source_path
- evidence/section_02_evidence_package.json
- source_span
- One interesting case was the transcriptomically isolated Vip Lamp5 Lhx6 type, which consists of deep L5/L6 neurogliaform cells (NGCs).
- study_system
- mouse M1 cortex; Patch-seq
- section_title
- Molecular Identity and Transcriptomic Taxonomy
- evidence_summary
- Patch-seq mapping: Vip Lamp5 Lhx6 t-type localizes to deep cortical layers and morphology matches NGC; conflicts with simple 'Vip = upper layer bipolar' rule.
- review_bundle_ref
- analysis_bundle:ab-2ce40c33e827
- replication_status
- single_study
- review_package_ref
- analysis_bundle:ab-2ce40c33e827
- source_artifact_ref
- wiki_page:computationalreviewvip-02-classification
- origin_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_02_evidence_package.json
- commit_sha
- 95e761177f7d2ec565983d3307c14ec238f9677c
- created_by
- persona-jerome-lecoq-gbo-neuroscience
- repository_url
- https://github.com/AllenNeuralDynamics/ComputationalReviewVIP
Raw fields (4)
- raw_fields
{ "n": null, "doi": "10.1038/s41586-020-2907-3", "claim": "Scala et al. (2021) identified a transcriptomically isolated Vip Lamp5 Lhx6 t-type that corresponds morphologically to deep L5/L6 neurogliaform cells (NGCs), an exception to the typical upper-layer Vip distribution.", "title": null, "cite_key": "Scala2021", "evidence": "Patch-seq mapping: Vip Lamp5 Lhx6 t-type localizes to deep cortical layers and morphology matches NGC; conflicts with simple 'Vip = upper layer bipolar' rule.", "effect_size": null, "text_access": "fulltext", "study_system": "mouse M1 cortex; Patch-seq", "target_section": "section_02", "_source_cluster": "cluster_01_molecular_taxonomy", "replication_status": "single_study", "_source_cluster_index": 35, "claim_source_sentence": "One interesting case was the transcriptomically isolated Vip Lamp5 Lhx6 type, which consists of deep L5/L6 neurogliaform cells (NGCs)." }- source_refs
[ "paper:paper-be132b319290" ]
- evidence_refs
[ { "ref": "paper:paper-be132b319290" } ]- source_policy
{ "mode": "public_source_pointer_with_short_context", "notes": [ "Local review repositories are read-only inputs.", "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose." ], "source_commit_sha": "95e761177f7d2ec565983d3307c14ec238f9677c", "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP" }