Details

scope
mouse ALM L5B PT, VM thalamus, M1 PT, ALM/M1-projecting TC neurons
section_id
section_02
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_02_evidence_package.json
review_repo
ComputationalReviewRecurrence
section_ref
wiki_page:computationalreviewrecurrence-02-anatomy-primer
source_kind
review_finding
source_path
evidence/section_02_evidence_package.json
study_system
mouse ALM L5B PT, VM thalamus, M1 PT, ALM/M1-projecting TC neurons
section_title
2. Mouse-cortex anatomy primer — areal map, layer structure, projection-class nomenclature (IT / PT / CT), tools available for E→E dissection (paired patch, Cre lines, two-photon-targeted patch, optogenetics, EM reconstruction)
evidence_summary
Channelrhodopsin-assisted circuit mapping with retrograde labelling and slice electrophysiology in mouse ALM, M1, and VM thalamus.
review_bundle_ref
analysis_bundle:ab-d9c479db9be9
replication_status
replication_unknown
review_package_ref
analysis_bundle:ab-d9c479db9be9
source_artifact_ref
wiki_page:computationalreviewrecurrence-02-anatomy-primer
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence/blob/79ce062d54a924ce05953ec90aa9d26044d2b48f/evidence/section_02_evidence_package.json
commit_sha
79ce062d54a924ce05953ec90aa9d26044d2b48f
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence
Raw fields (6)
claim_text
Mouse anterolateral motor cortex (ALM) and ventromedial (VM) thalamus form a cell-type-specific excitatory thalamo-cortico-thalamic loop: VM TC axons preferentially excite layer-1 apical-tuft dendrites of VM-projecting L5B PT neurons in ALM (with HCN-mediated gain control), and ALM PT axons reciprocally excite ALM-projecting VM neurons located medially, segregated from M1-related VM circuits.
raw_fields
{
  "n": null,
  "doi": "10.1523/jneurosci.1333-18.2018",
  "claim": "Mouse anterolateral motor cortex (ALM) and ventromedial (VM) thalamus form a cell-type-specific excitatory thalamo-cortico-thalamic loop: VM TC axons preferentially excite layer-1 apical-tuft dendrites of VM-projecting L5B PT neurons in ALM (with HCN-mediated gain control), and ALM PT axons reciprocally excite ALM-projecting VM neurons located medially, segregated from M1-related VM circuits.",
  "cite_key": "Guo2018",
  "evidence": "Channelrhodopsin-assisted circuit mapping with retrograde labelling and slice electrophysiology in mouse ALM, M1, and VM thalamus.",
  "effect_size": null,
  "text_access": "abstract_only",
  "study_system": "mouse ALM L5B PT, VM thalamus, M1 PT, ALM/M1-projecting TC neurons",
  "argument_role": "supporting",
  "replication_status": "replication_unknown",
  "claim_source_sentence": "In cortex, thalamocortical (TC) axons from VM thalamus excited VM-projecting pyramidal tract (PT) neurons in layer 5B of ALM... The strongest connections in the VM → PT circuit were localized to apical tuft dendrites of PT neurons, in layer 1... In thalamus, axons from ALM PT neurons excited ALM-projecting VM neurons, located medially in VM... Conversely, M1 PT axons excited M1- but not ALM-projecting VM neurons.",
  "source_provenance_status": "non_substring_match",
  "replication_evidence_dois": [],
  "effect_size_source_sentence": null
}
source_refs
[
  "paper:e0b74a67-34de-4660-b780-ff95451e6841"
]
source_span
In cortex, thalamocortical (TC) axons from VM thalamus excited VM-projecting pyramidal tract (PT) neurons in layer 5B of ALM... The strongest connections in the VM → PT circuit were localized to apical tuft dendrites of PT neurons, in layer 1... In thalamus, axons from ALM PT neurons excited ALM-projecting VM neurons, located medially in VM... Conversely, M1 PT axons excited M1- but not ALM-projecting VM neurons.
evidence_refs
[
  {
    "ref": "paper:e0b74a67-34de-4660-b780-ff95451e6841"
  }
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "79ce062d54a924ce05953ec90aa9d26044d2b48f",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewRecurrence"
}

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