Details

scope
Adult mouse VISp; Chat-IRES-Cre × reporter labeling; me-type clustering
section_id
section_04
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_04_evidence_package.json
review_repo
ComputationalReviewVIP
section_ref
wiki_page:computationalreviewvip-04-morphology
source_kind
review_finding
source_path
evidence/section_04_evidence_package.json
source_span
The L2/3 Chat -labeled neurons, mostly associated with the Vip-Ptprt-Pkp2 t-type, were in a few similar me-types ( Fig.
study_system
Adult mouse VISp; Chat-IRES-Cre × reporter labeling; me-type clustering
section_title
Morphological Diversity
evidence_summary
Cre-line-by-me-type mapping with transcriptomic-line consistency scores in the Allen Patch-seq/me-type pipeline.
review_bundle_ref
analysis_bundle:ab-2ce40c33e827
replication_status
replicated
review_package_ref
analysis_bundle:ab-2ce40c33e827
source_artifact_ref
wiki_page:computationalreviewvip-04-morphology
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_04_evidence_package.json
commit_sha
95e761177f7d2ec565983d3307c14ec238f9677c
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewVIP
Raw fields (5)
claim_text
L2/3 Chat-Cre labeled neurons (a known subset of Vip cells) map predominantly to a small number of related me-types associated with the Vip-Ptprt-Pkp2 transcriptomic type, whereas the broader Vip class spans multiple me-types adjacent to Sst territory in the morpho-electric space.
raw_fields
{
  "n": 0,
  "doi": "10.1038/s41593-019-0417-0",
  "claim": "L2/3 Chat-Cre labeled neurons (a known subset of Vip cells) map predominantly to a small number of related me-types associated with the Vip-Ptprt-Pkp2 transcriptomic type, whereas the broader Vip class spans multiple me-types adjacent to Sst territory in the morpho-electric space.",
  "title": null,
  "cite_key": "Gouwens2019",
  "evidence": "Cre-line-by-me-type mapping with transcriptomic-line consistency scores in the Allen Patch-seq/me-type pipeline.",
  "effect_size": null,
  "text_access": "fulltext",
  "study_system": "Adult mouse VISp; Chat-IRES-Cre × reporter labeling; me-type clustering",
  "_source_cluster": "cluster_03_morphology",
  "replication_status": "replicated",
  "_source_cluster_index": 36,
  "claim_source_sentence": "The L2/3 Chat -labeled neurons, mostly associated with the Vip-Ptprt-Pkp2 t-type, were in a few similar me-types ( Fig.",
  "replication_evidence_dois": [
    "10.15252/embj.2021110565",
    "10.1038/s41593-020-0685-8"
  ],
  "effect_size_source_sentence": null
}
source_refs
[
  "paper:paper-b9e0351c6ddd"
]
evidence_refs
[
  {
    "ref": "paper:paper-b9e0351c6ddd"
  }
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "95e761177f7d2ec565983d3307c14ec238f9677c",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP"
}

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