Details

scope
review of mouse cortical interneuron taxonomy
section_id
section_05
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_05_evidence_package.json
effect_size
PV + SST + 5HT3aR ≈ 100% of cortical GABAergic INs (S1)
review_repo
ComputationalReviewVIP
section_ref
wiki_page:computationalreviewvip-05-electrophysiology
source_kind
review_finding
source_path
evidence/section_05_evidence_package.json
study_system
review of mouse cortical interneuron taxonomy
section_title
Intrinsic Electrophysiology
evidence_summary
review compiling 5HT3aR-BAC EGFP genetic targeting + scRT-PCR/IHC overlap data in mouse S1
review_bundle_ref
analysis_bundle:ab-2ce40c33e827
replication_status
replicated
review_package_ref
analysis_bundle:ab-2ce40c33e827
source_artifact_ref
wiki_page:computationalreviewvip-05-electrophysiology
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_05_evidence_package.json
commit_sha
95e761177f7d2ec565983d3307c14ec238f9677c
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewVIP
Raw fields (6)
claim_text
PV-, SST- and 5HT3aR-expressing cortical interneurons together account for nearly 100% of GABAergic neurons in mouse somatosensory cortex, with the 5HT3aR group (which contains all VIP+ cells plus VIP-negative L1/Lamp5 cells) forming the third major group whose intrinsic electrophysiology is the most heterogeneous.
raw_fields
{
  "n": null,
  "doi": "10.1002/dneu.20853",
  "claim": "PV-, SST- and 5HT3aR-expressing cortical interneurons together account for nearly 100% of GABAergic neurons in mouse somatosensory cortex, with the 5HT3aR group (which contains all VIP+ cells plus VIP-negative L1/Lamp5 cells) forming the third major group whose intrinsic electrophysiology is the most heterogeneous.",
  "title": null,
  "cite_key": "Rudy2011",
  "evidence": "review compiling 5HT3aR-BAC EGFP genetic targeting + scRT-PCR/IHC overlap data in mouse S1",
  "effect_size": "PV + SST + 5HT3aR ≈ 100% of cortical GABAergic INs (S1)",
  "text_access": "fulltext",
  "study_system": "review of mouse cortical interneuron taxonomy",
  "_source_cluster": "cluster_04_intrinsic_electrophysiology",
  "replication_status": "replicated",
  "_source_cluster_index": 45,
  "claim_source_sentence": "This analysis has provided strong evidence that three major groups of neurons, those expressing the Ca 2+ -binding protein parvalbumin (PV), those expressing the neuropeptide somatostatin (SST), and those expressing 5HT3aRs account for nearly 100% of GABAergic neurons in somatose...",
  "replication_evidence_dois": [
    "10.1523/jneurosci.1869-10.2010"
  ],
  "effect_size_source_sentence": "three major groups of neurons, those expressing the Ca 2+ -binding protein parvalbumin (PV), those expressing the neuropeptide somatostatin (SST), and those expressing 5HT3aRs account for nearly 100% of GABAergic neurons in somatosensory cortex."
}
source_refs
[
  "paper:34a07597-2d6f-4552-b9cf-d2d11817f9f9"
]
source_span
This analysis has provided strong evidence that three major groups of neurons, those expressing the Ca 2+ -binding protein parvalbumin (PV), those expressing the neuropeptide somatostatin (SST), and those expressing 5HT3aRs account for nearly 100% of GABAergic neurons in somatose...
evidence_refs
[
  {
    "ref": "paper:34a07597-2d6f-4552-b9cf-d2d11817f9f9"
  }
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "95e761177f7d2ec565983d3307c14ec238f9677c",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP"
}

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