Details

scope
mouse VISp Patch-seq
section_id
section_05
source_url
https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_05_evidence_package.json
effect_size
sPC2 ↔ Rin: r = 0.90 (Pearson); sPC1(norm) ↔ sag
review_repo
ComputationalReviewVIP
section_ref
wiki_page:computationalreviewvip-05-electrophysiology
source_kind
review_finding
source_path
evidence/section_05_evidence_package.json
study_system
mouse VISp Patch-seq
section_title
Intrinsic Electrophysiology
evidence_summary
PCA over 4,200+ Patch-seq cells; principal-component-vs-feature correlations across all neurons (excitatory + inhibitory).
review_bundle_ref
analysis_bundle:ab-2ce40c33e827
replication_status
replication_unknown
review_package_ref
analysis_bundle:ab-2ce40c33e827
source_artifact_ref
wiki_page:computationalreviewvip-05-electrophysiology
origin_url
https://github.com/AllenNeuralDynamics/ComputationalReviewVIP/blob/95e761177f7d2ec565983d3307c14ec238f9677c/evidence/section_05_evidence_package.json
commit_sha
95e761177f7d2ec565983d3307c14ec238f9677c
created_by
persona-jerome-lecoq-gbo-neuroscience
repository_url
https://github.com/AllenNeuralDynamics/ComputationalReviewVIP
Raw fields (6)
claim_text
Patch-seq electrophysiological 'subthreshold-2' principal component is highly correlated with input resistance (Pearson r = 0.90), and a separate 'subthreshold (normalized) 1' PC reflects sag amplitude during hyperpolarizing current — providing two orthogonal axes of intrinsic-property variation that can be regressed onto t-type identity.
raw_fields
{
  "n": 4270,
  "doi": "10.1016/j.cell.2020.09.057",
  "claim": "Patch-seq electrophysiological 'subthreshold-2' principal component is highly correlated with input resistance (Pearson r = 0.90), and a separate 'subthreshold (normalized) 1' PC reflects sag amplitude during hyperpolarizing current — providing two orthogonal axes of intrinsic-property variation that can be regressed onto t-type identity.",
  "title": null,
  "cite_key": "Gouwens2020a",
  "evidence": "PCA over 4,200+ Patch-seq cells; principal-component-vs-feature correlations across all neurons (excitatory + inhibitory).",
  "effect_size": "sPC2 ↔ Rin: r = 0.90 (Pearson); sPC1(norm) ↔ sag",
  "text_access": "fulltext",
  "study_system": "mouse VISp Patch-seq",
  "_source_cluster": "cluster_04_intrinsic_electrophysiology",
  "replication_status": "replication_unknown",
  "_source_cluster_index": 28,
  "claim_source_sentence": "Many of the sPCs were strongly related to traditional electrophysiological features; for example, the “subthreshold 2” sPC was correlated with input resistance (Pearson’s r = 0.90), and the “subthreshold (normalized) 1” sPC reflected the amount of sag induced by hyperpolarizing current steps (lower ...).",
  "replication_evidence_dois": [],
  "effect_size_source_sentence": "the “subthreshold 2” sPC was correlated with input resistance (Pearson’s r = 0.90)"
}
source_refs
[
  "paper:paper-pm-33186530"
]
source_span
Many of the sPCs were strongly related to traditional electrophysiological features; for example, the “subthreshold 2” sPC was correlated with input resistance (Pearson’s r = 0.90), and the “subthreshold (normalized) 1” sPC reflected the amount of sag induced by hyperpolarizing current steps (lower ...).
evidence_refs
[
  {
    "ref": "paper:paper-pm-33186530"
  }
]
source_policy
{
  "mode": "public_source_pointer_with_short_context",
  "notes": [
    "Local review repositories are read-only inputs.",
    "SciDEX stores paper metadata, structured evidence, file pointers, and short citation contexts; it does not copy full review prose."
  ],
  "source_commit_sha": "95e761177f7d2ec565983d3307c14ec238f9677c",
  "source_repository_url": "https://github.com/AllenNeuralDynamics/ComputationalReviewVIP"
}

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